Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04319 ATGGCAGAAATAATAGTGTCATTTGTTTTAGAGAAACTCTACAATATTGCAGAAAAAGAAGCAACTTTGCTGATAGGTGTACATGGAGACTTTGAAGAGATCAAACATGAACTTGAGAGCATCAAAGCCTTCCTCAAGGATGCAGACACAAGGGCTGCTGATGAAGGAGAAGGAGGGTCTTCTGAAGGAGTCAACACTTGGGTGAAGCAGCTAAGAGAAGCATCTTTTCGCATAGAAGATGTGATTGATTGCTATAGCATGTATTTGGTACAGAGGGAGATCTATTCTGGATTCATAGCTCCAATCAGAAAGGCAGCTCAAGTTATCAAAACCATGAAACAAAGGGATAAGATTGCTTCTGATATGAAAAACATCATGTCTTCGGTTGGTGAAATCAAAGAAAGAAGTGCTAGGTATAAGTTTACGGCTGAAAATGGACAAGGAAGCTCTAAAGGGACTACTGGAAATGAAAGCTTTGGTGACCTTCGAATGGCTTCGCATTTCATTGAAGAGACTCAAATTGTGGGATTTGAGTCAGCAAGAGATGAAATGGTTAGTTGTTTGGTGGAGGGAACCAATGAGCTCATGTTGGTTTCTGTGGTTGGTATGGGAGGACTTGGAAAAACAACTCTTTCTAAGCATGTTTTTGATAACAAGCTTGTGAAAAAGCACTTCGATTGTCGATGTTTCATCACAGTTTCTCAATCCTATAATATGAAAGAGTTGTTGGTTGATATGGTAAAGAAGTTTTGCGATGACAGCAATGAGCCTACACCAATGGGTCTGCAGGAGATGGATGGCATTACATTGATTGCTCAAGTGAGAGAATACCTTGAATCAAAAAGGTACTTGGTGTTTTTTGATGATGTTTGGAAAGAAATTTTTTGTGATGAGATTGTACATGCTTTGTCTAATAATAAGAAAGGTAGTAGAATCATTGTGACCACTAGAACAATGCAAGTAGCCGAATATTTTAAGAAATCTTTTCATGTTTATATTCACAAGCTACAGCCTTTGTCTTCAAAGAAAGCTTGGAAACTGTTCTGTAAAAAGGCATTTAGATCTGAGCCTGAAAATCTGTTTCCGAAAGATCTTGAGAAAATGTCTGAGGAAATTGTTCAAAAATGTGGAGGACTACCGCTGGCAATTGTGGCCATTGGTGGTCTTTTATCAACAAAATCTAAAACCATTTTTGAGTGGGAAAAGGTGAGAAAATATCTGAGAACAGAGTTAGAGAACAATACACATCTAACTGGTGTAATGAAGATATTATCCCTTAGTTATGATGATTTGCCTTACCATTTGAAATCATGCATGTTATATTTTGGTATATATCCTGAGGACTACGCCATCAAACGCAATATCCTGAGGACTACACCATCAAACGCAAAAGACTTACTCGACAATGGATGGCTGAAGGATTTGTTAAGAATGAGCACAGAAGACCAATGGAGGAAGTTGCTGAAGAGTACATGA 1476 0.3821 MAEIIVSFVLEKLYNIAEKEATLLIGVHGDFEEIKHELESIKAFLKDADTRAADEGEGGSSEGVNTWVKQLREASFRIEDVIDCYSMYLVQREIYSGFIAPIRKAAQVIKTMKQRDKIASDMKNIMSSVGEIKERSARYKFTAENGQGSSKGTTGNESFGDLRMASHFIEETQIVGFESARDEMVSCLVEGTNELMLVSVVGMGGLGKTTLSKHVFDNKLVKKHFDCRCFITVSQSYNMKELLVDMVKKFCDDSNEPTPMGLQEMDGITLIAQVREYLESKRYLVFFDDVWKEIFCDEIVHALSNNKKGSRIIVTTRTMQVAEYFKKSFHVYIHKLQPLSSKKAWKLFCKKAFRSEPENLFPKDLEKMSEEIVQKCGGLPLAIVAIGGLLSTKSKTIFEWEKVRKYLRTELENNTHLTGVMKILSLSYDDLPYHLKSCMLYFGIYPEDYAIKRNILRTTPSNAKDLLDNGWLKDLLRMSTEDQWRKLLKST 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04319 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 442 IPR027417 -
Mepo3g04319 491 Gene3D - 5 119 - -
Mepo3g04319 491 Gene3D - 428 488 IPR036388 -
Mepo3g04319 491 Pfam NB-ARC domain 182 430 IPR002182 GO:0043531
Mepo3g04319 491 CDD RX-CC_like 2 134 IPR038005 -
Mepo3g04319 491 Gene3D - 161 332 IPR027417 -
Mepo3g04319 491 FunFam Probable disease resistance protein At1g61300 160 328 - -
Mepo3g04319 491 Gene3D - 338 427 IPR042197 -
Mepo3g04319 491 PRINTS Disease resistance protein signature 376 390 - -
Mepo3g04319 491 PRINTS Disease resistance protein signature 277 291 - -
Mepo3g04319 491 PRINTS Disease resistance protein signature 197 212 - -
Mepo3g04319 491 Pfam Rx N-terminal domain 5 100 IPR041118 -
Mepo3g04319 491 PANTHER DISEASE RESISTANCE PROTEIN RP 33 454 IPR044974 GO:0006952
Mepo3g04319 491 FunFam Probable disease resistance protein At5g66910 338 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04319 Mepo-Chr3 52536546 52538021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04319 194 395 WRKY Transcription Factor Family AT5G45050 26.570 3.48e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04319 K13457 - vun:114181831 548.51