Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04318 ATGATTCCGAATAATTTTCTAAGGAAACATGGGGTCCAACTTTCGACTGTCGCAACCCTCACTGTTCCTGGCGGCACCATCTGGCATCTAGGAATGAAAAAGGTTGGCAATTGTATTTGTTTGTTGGATGGCTGGCAAGATTTTATTCAACGCTACTCAATTGGCATTGGATACTTACTAGTATTCACATATCAAGGAAATTCAAATTTCATCGTTCATATCTTCGGTACTGCTGAGTTAGACTATCAATCAGCATCAATAAGCCGGACTAAAGAGCCTTTCCATGAAGACTATCATCATATCTTTGAAGACGTTGAAGATATTAACTCCTTTGATTTCATGGATTCAGCACCTTTAAACCCTACTGGTGCGTTACAAGGCATGGATTTTACGGGATGTACGGATCAACTGATACCAGCGGAGAATTGTATCCAACAAAGACATGAAAATAAGAATACCAAGAAAATTTCAAGAAAGAAGCGGAAATCGCAGAAATCAGAACTTAGTAATAATGGTGAAAGGGTAAACGCTCATATCCCAAAGAGGGGAAGAGGCCGAAGGTCCAATCGCAATGATGGTGAAAGAAGTACTCAGCCGACACAGTCACAGGTGGAAGACCCGACCCAGTACATGAATTATCAGGATCAACTACATGATGCCATAGATGGTGGTTATGACTCCCAGCAGTTTCTTGATCTGGTTGAGGGTGGCGATGTTCAGCAGGGCGAGGATGTTGTGCCTCGACCAGACGTTGATGATATTGCGGCTCAAGAAGCCCCAGAGCAGTTACCTGAAGTGCCTCCCTTTCCTGGAGGGCCTACGGATATATCTGTGTTGTCCTCTTATGCTTCTCATGTTGCATTGCCGCTGTGGTTTAATGCAAATAATTTAGGTCATGAGGGGATGAGCAATGAGCAATTTCATGCAGCATGA 933 0.433 MIPNNFLRKHGVQLSTVATLTVPGGTIWHLGMKKVGNCICLLDGWQDFIQRYSIGIGYLLVFTYQGNSNFIVHIFGTAELDYQSASISRTKEPFHEDYHHIFEDVEDINSFDFMDSAPLNPTGALQGMDFTGCTDQLIPAENCIQQRHENKNTKKISRKKRKSQKSELSNNGERVNAHIPKRGRGRRSNRNDGERSTQPTQSQVEDPTQYMNYQDQLHDAIDGGYDSQQFLDLVEGGDVQQGEDVVPRPDVDDIAAQEAPEQLPEVPPFPGGPTDISVLSSYASHVALPLWFNANNLGHEGMSNEQFHAA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04318 310 SUPERFAMILY DNA-binding pseudobarrel domain 1 76 IPR015300 -
Mepo3g04318 310 MobiDBLite consensus disorder prediction 144 207 - -
Mepo3g04318 310 Pfam B3 DNA binding domain 1 75 IPR003340 GO:0003677
Mepo3g04318 310 Gene3D - 1 78 IPR015300 -
Mepo3g04318 310 PANTHER B3 DOMAIN-CONTAINING 1 188 - -
Mepo3g04318 310 CDD B3_DNA 1 75 IPR003340 GO:0003677
Mepo3g04318 310 ProSiteProfiles B3 DNA-binding domain profile. 1 78 IPR003340 GO:0003677
Mepo3g04318 310 SMART B3_2 1 78 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04318 Mepo-Chr3 52518203 52520904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04318 2 107 B3 DNA Binding Superfamily AT3G18990 43.519 6.36e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g04318 B3 2.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04318 - - mtr:25482671 246.128