Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04311 ATGGCCACTCCTCTCTTTTTCTACCTTCTACTTGTTTCCTTCACTAGTTTTCCTTCAATTTCTTCACTTCAACTTTCTTTGAAAAACCAAGCTTCAATCTTAGTTTCAATGAAACAAGATTTTGAACCTTCTTCCAACACTTCTTTAAGTAGTTGGAACATGTCTAACTACATGTCACTTTGTACTAATTGGTATGGAATTCAATGTGACCATACCAACATGTCTATAGTTTCACTTGATATTTCAAATTTAAACATTTCAGGTTCATTTTCACCTCTCATTACAAAACTCTACAACCTTGTAAATGTTTCAATCCAAGGAAATAGCTTCTATGGTGAGTTTCCAACTGAAATTCATAAGCTGCAAAGTTTGAAATGCCTTAACATATCAAACAATATGTTTAGTGGAAACTTGAGTTGGGAATTCAACAAATTGAAAGAGCTTGAAGTGTTGGATATTTACAACAATGGTTTCAATGGTTCGCTTCCTCGCGGTGTTACTCAGTTGTCAAGTCTCAAGCATTTGAATTTTGGAGGGAATTACTTTTCTGGAAAAATTCCTACAAGTTATGGAGAAATGAAACAGCTCAATTTTTTGTTTCTTGCTGGAAATGATTTGAGTGGTTTTTTACCTAGTGAGCTTGGAAACTTAACTAGTTTGGAAAATCTTTATTTAGGTTATTTCAATCAATTTGATGGTGGAATTCCAAAAGAGTTTGGTAATTTGATTAATTTGGTTCATTTAGACCTAGCAAGTTGTTTCTTGAAAGGTTCAATTCCACATGAGTTAGGTCAACTTAACAAGCTAGATACACTTTTCTTGCAAAAAAATCAACTCACTGGTTTTATTCCACCTGAATTAGGTAATTTGAGTAGATTGAATGCTCTTGATTTATCACTCAATAACCTAACAGGTGGAATTCCAAACGAATTCTCGAACCTTCTAGAACTTTCTCTTTTGAACTTGTTTATCAATAAATTTCACGGCGAAATTCCTGATTTCATTTCCGAGCTTCCTAAATTGGAAGTTCTTAAGCTTTGGAGGAATAACTTCACTGGCGTTATTCCTTCGAAGCTAGGTCAGAATGGAAGATTAACCGAGGTTGATTTGTCGACAAATAAACTCACTGGAATATTGCCAAAATCACTTTGCTTTGGGAAGAGACTAAAGATTTTGATCTTGCTTAACAACTTTTTGTTTGGTTCTTTGCCTAATGATCTTGGTCAATGCTACACACTCCAAAGAGTTAGAATTGGTCAAAACTATTTGACTGGTTCAATTCCACATGGTTTTCTTTACTTACCAAATCTATCTCTTTTGGAACTACAGAACAATTATCTCAGTGGTGTGATTCCACAACAAACACATAAAAACAAAACCTCCAAATTAGAACAGTGTAATCTATCAAACAATAGGTTATCAGGTTCTTTACCAACCTCAATTGGAAATTTTCCAAATTTGCAAACTCTTCAACTTAGTGGAAACAGATTCTCAGGTCAAATTCCATCAGATATAGGAAAACTCAAAAATATTCTCAAATTAGATATAAGCAGCAACAACTTTTCAGGTACAATTCCAAGTGAAATAGGTAAATGTACCTTACTAACTTATTTGGATTTGAGTCAAAACCAATTTTCAGGTCCTATTCCAATTCAACTTGCTCAAATTCATATACTAAACCATCTTAATGTTTCATGGAATCACTTAAGCCAAAGCCTTCCCAAAGAGCTAGGAGCCTTAAAGGGCTTAACTTCAGTAGATTTCTCTCACAATAACTTCTCCGGTTCGATACCAGAAGGAGGACAATTCTCAACTTTTAAGCCAAATTCCTTTGAAGGTAATCCTCAACTATGTGGTTATGTGTTGGTTGAGTTCAATCCATGCAAAGTTTCTTCAACAGATGAATTAGAATCTCAACAAAAAAACGGTTCGAGAAACGGTTTCCCTGGAAAGTTTAAGTTGCTTTTCGCGTTGGCGTTATTGTTATGTTCGTTGATTTTTGTAACTTTAGCTATCATGAAGAGTAGAAAATCAAGGAGGAATCATTCAAGTTCATGGAAATTAACAGCATTTCAGAAGATGGAATATGGAAGTGAAGAAATCATAGGTTGCATAAAGGAAAGCAATGTGATAGGAAGAGGTGGAGCAGGTGTTGTGTACAAAGGAACAATGCCAAATGGAGATGAAATTGCTGTGAAGAAATTGTTAGGAATCAACAAAGGAACTTCTTCTTCTCATGCTGATAACGGCTTTTCAGCCGAAATTAAGACATTAGGTAGAATCAGACACAGATATATTGTCAGGTTGGTTGCATTTTGTACAAACAAAGAAACAAATTTGCTTGTTTATGATTATATGGAAAATGGTAGCCTTGGTGAAGTTTTGCATGGGAAAAGAGGTGAGTTTTTGAAATGGGATGTTAGGTTGAAAATTGCTGTTGAAGCTGCTAAAGGACTTTGTTATTTGCATCATGATTGTTCACCTTTGATCATTCATAGAGATGTTAAGTCAAATAATATATTGTTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATAATGGGAATTCAGAATGCATGTCTTCTATTGCTGGTTCTTATGGATATATTGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTGCTGCTAGAACTCATCACAGGGAAAAGGCCAGTGGGGGATTTTGAGGAAGAAGGTTTAGACATTGTTCAATGGACCAAAATGAAAACTAATTGGAATAAAGATATGGTGATGAAGATCCTTGATGAGAGGCTACCTCAAATTCCTTTAGATGAAGCAAAACAAGTGTTTTTTGTGGCAATGTTATGTGTTCATGAACATAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAGATGCTTGCACAAGCAAAGTAA 2955 0.3513 MATPLFFYLLLVSFTSFPSISSLQLSLKNQASILVSMKQDFEPSSNTSLSSWNMSNYMSLCTNWYGIQCDHTNMSIVSLDISNLNISGSFSPLITKLYNLVNVSIQGNSFYGEFPTEIHKLQSLKCLNISNNMFSGNLSWEFNKLKELEVLDIYNNGFNGSLPRGVTQLSSLKHLNFGGNYFSGKIPTSYGEMKQLNFLFLAGNDLSGFLPSELGNLTSLENLYLGYFNQFDGGIPKEFGNLINLVHLDLASCFLKGSIPHELGQLNKLDTLFLQKNQLTGFIPPELGNLSRLNALDLSLNNLTGGIPNEFSNLLELSLLNLFINKFHGEIPDFISELPKLEVLKLWRNNFTGVIPSKLGQNGRLTEVDLSTNKLTGILPKSLCFGKRLKILILLNNFLFGSLPNDLGQCYTLQRVRIGQNYLTGSIPHGFLYLPNLSLLELQNNYLSGVIPQQTHKNKTSKLEQCNLSNNRLSGSLPTSIGNFPNLQTLQLSGNRFSGQIPSDIGKLKNILKLDISSNNFSGTIPSEIGKCTLLTYLDLSQNQFSGPIPIQLAQIHILNHLNVSWNHLSQSLPKELGALKGLTSVDFSHNNFSGSIPEGGQFSTFKPNSFEGNPQLCGYVLVEFNPCKVSSTDELESQQKNGSRNGFPGKFKLLFALALLLCSLIFVTLAIMKSRKSRRNHSSSWKLTAFQKMEYGSEEIIGCIKESNVIGRGGAGVVYKGTMPNGDEIAVKKLLGINKGTSSSHADNGFSAEIKTLGRIRHRYIVRLVAFCTNKETNLLVYDYMENGSLGEVLHGKRGEFLKWDVRLKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDNGNSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKRPVGDFEEEGLDIVQWTKMKTNWNKDMVMKILDERLPQIPLDEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAK 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04311 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 673 785 - -
Mepo3g04311 984 ProSiteProfiles Protein kinase domain profile. 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04311 984 SMART LRR_typ_2 266 290 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 193 217 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 484 508 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 338 362 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 434 457 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 556 580 IPR003591 -
Mepo3g04311 984 SMART LRR_typ_2 145 169 IPR003591 -
Mepo3g04311 984 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Mepo3g04311 984 Gene3D Ribonuclease Inhibitor 364 629 IPR032675 -
Mepo3g04311 984 SMART serkin_6 705 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04311 984 Gene3D Transferase(Phosphotransferase) domain 1 786 984 - -
Mepo3g04311 984 Coils Coil 973 984 - -
Mepo3g04311 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 342 632 - -
Mepo3g04311 984 Pfam Protein tyrosine and serine/threonine kinase 707 980 IPR001245 GO:0004672|GO:0006468
Mepo3g04311 984 SUPERFAMILY L domain-like 54 326 - -
Mepo3g04311 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 786 984 - -
Mepo3g04311 984 Gene3D Ribonuclease Inhibitor 187 283 IPR032675 -
Mepo3g04311 984 FunFam Leucine-rich repeat receptor-like protein kinase 27 188 - -
Mepo3g04311 984 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 230 335 - -
Mepo3g04311 984 Gene3D Ribonuclease Inhibitor 284 363 IPR032675 -
Mepo3g04311 984 SUPERFAMILY Protein kinase-like (PK-like) 697 980 IPR011009 -
Mepo3g04311 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Mepo3g04311 984 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Mepo3g04311 984 Gene3D Phosphorylase Kinase; domain 1 671 785 - -
Mepo3g04311 984 PANTHER RECEPTOR-LIKE PROTEIN 55 388 981 - -
Mepo3g04311 984 SUPERFAMILY RNI-like 247 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04311 Mepo-Chr3 52372096 52376902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04311 46 982 Receptor kinase-like Gene Family AT5G65700 56.656 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g04311 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04311 - - gmx:100803075 1501.11