Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04305 ATGATATCTCAGACTCATTCATGTGCTTTGATTGCAACAATAATATTTTTCGTTACAGCACAAGTAAATTCCTTTTCAGAAGTTGATAAGATAAGTAGTTTACCTCAGCAGCCAAAAGTAGGATTTCAACAATATGCTGGTTACATTACAGTTGATGAAGTGCAGAAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTTGAACCAGCTTCCAAGCCAGTAGTGCTTTGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTGGAGCATGGTCCATTCAAACCAACTAAAAATGGTCTTATTAAAAATGATTACAGTTGGAACAAAGAGGCAAACATGCTGTACTTGGAATCACCGGCCGGTGTTGGTTTCTCCTACTCTACAAATGAATCATTCTACGACTCTGTGAACGATGATTTGACAGCAAGGGATAATCTTATTTTTCTACAACATTGGTTCACTAAATTCTCAGAATACAAAAACAATGAGTTCTTTATCACTGGGGAAAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAAAGCAAATTCAATCTCAAGGGAATTGCAATAGGGAATCCTCTACTGGAATTCAACACAGATTTCAACTCTAGAGCTGAGTATCTCTGGTCTCATGGACTGATATCAGATTCAACCTATGATTCCTTCACAAAAATATGCAACTTTTCACAAATTAGAAGACAATATGCAAGCGGCGCACTTACTACCGTTTGTGCAAGAGTAAATAGGCTAGTGTCAATGGAGGTTAGTAGATATATTGATTCATATGATGTTACTCTTGATGTGTGTCTATCAACAGTAGAACAACAAGCATTTGTGCTTACTCAACTGCAAGAGGGAGAGAAGATAGATGTTTGTGTGGAAGATGAAACATTCACATACTTGAATAGGAAAGAAGTGCAAAACGCTCTTCATGCTAAGCTTGTAGGGATCACCACATGGACCACTTGCAGTGGAGTTCTCAAATATGACATGCAAAATTTAGAGATTCCAACCATAAATATTCTGGGAAAACTAGTTGAGTCAGGTGTAAGAGTTCTTGTATACAGTGGAGATCAAGATTCAGTATTACCGTTGCTTGCTACACGGTCTTTGGTAAATGGATTAGCCAAAGACATCGGTTTGAACACAACAGAGTCCTATAGAACTTGGTTTAATGGAAGACAGGTAGCTGGATGGACACAAGTATATGGTGACATGTTATCCTTTGCAACCATAAGAGGAGCAGCTCATGAGGCTCCATTTTCACAACCAGGGAGATCGTTGGTTCTGTTAAAGGCATTTTTGGAAGGAAAATCACTTCCAACTATTCTTTGA 1374 0.3872 MISQTHSCALIATIIFFVTAQVNSFSEVDKISSLPQQPKVGFQQYAGYITVDEVQKRALFYYFVEAEVEPASKPVVLWLNGGPGCSSVGAGAFVEHGPFKPTKNGLIKNDYSWNKEANMLYLESPAGVGFSYSTNESFYDSVNDDLTARDNLIFLQHWFTKFSEYKNNEFFITGESYAGHYVPQLAQLIVQTKSKFNLKGIAIGNPLLEFNTDFNSRAEYLWSHGLISDSTYDSFTKICNFSQIRRQYASGALTTVCARVNRLVSMEVSRYIDSYDVTLDVCLSTVEQQAFVLTQLQEGEKIDVCVEDETFTYLNRKEVQNALHAKLVGITTWTTCSGVLKYDMQNLEIPTINILGKLVESGVRVLVYSGDQDSVLPLLATRSLVNGLAKDIGLNTTESYRTWFNGRQVAGWTQVYGDMLSFATIRGAAHEAPFSQPGRSLVLLKAFLEGKSLPTIL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04305 457 Gene3D - 305 340 - -
Mepo3g04305 457 FunFam Carboxypeptidase 24 454 - -
Mepo3g04305 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 437 IPR001563 GO:0004185|GO:0006508
Mepo3g04305 457 Pfam Serine carboxypeptidase 38 450 IPR001563 GO:0004185|GO:0006508
Mepo3g04305 457 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
Mepo3g04305 457 SUPERFAMILY alpha/beta-Hydrolases 22 455 IPR029058 -
Mepo3g04305 457 FunFam Carboxypeptidase 351 450 - -
Mepo3g04305 457 Gene3D - 351 450 - -
Mepo3g04305 457 Gene3D alpha/beta hydrolase 26 283 IPR029058 -
Mepo3g04305 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Mepo3g04305 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Mepo3g04305 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Mepo3g04305 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04305 Mepo-Chr3 52276056 52282486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04305 313 453 Calmodulin-binding Proteins AT2G22960 28.369 7.64e-17 76.6