Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04294 ATGGCTGAACAAACTGAGAAGACTTATCTCACTAATCGATCACTTCATAGTAATTCATTAGTTTACGAGTCGGCGTCGCAGCGCGAAATCGAGAAGGAAGAAATCCGCCAAAAGATTTTGCGGCAGAAAGAGTTGGAGGAGGAGGTGTGGAGGGAGCTTGCAATGGAGAGGGCGTTTGGAACCATGCAGAGGTCGACTCTTGATCACATCGGTGCTTCGCAACCATCATTGATTATGCCCCCTCCTGATATCAAACATTCTACTAACAACAAGGACAAAGTTATTCTATTGGCTAAGCCAGATATGAGTCTCTATAGTGCAAAGCGAAAAGCGGCGACACAAGATTTTCCTAGCGGTGAGCCTTCTGCAATTGGTATGAACAAAAAGCTGAAGGAGGAGTGGAGTTGTGAACTGTGTCAGATTAAAGCCACGAGTGAGAACGACTTGAATGATCATCTGAATGGTAAGAAGCATAAGGTTAGGGAAGCAAGACAGAAAAGGGAGATTGACAGGCACAACAAGAAAAGTCAAAACACTGTGATAGAGGTTACTGATACAGCCGTTAATTCAATAATATCAGGGGTTGATGCAGAAAAAGATCAAAAGACTCCTAACTGTTGCATAGTCTTGAATGTCATGAATGAGAATGTGGTTGATACAAAATCAAACAATGAGGAGCAACTTTTGGAGACAATGGTGGATAATGGTGTAAGTGTAACAGAATCCAAAAATGGGAAGAAGCTCGAGGAAACGACGGTTGATGAAAGAGTAACAGAATCTAAAAATGAGGAGCAACTTTTGGAGACGGTGTTGGATAATCGTGTAAGTGTAACAGAATCTAAAAATGAGAAGAAGCTCGGGGAAATGATGGTTGATGAAAGAGTAACAGAATCTAAAAATGAGGAGCAACTTTTGGAGACGGTGTTGGATAATGGTGTAAGTTTAACAGAATCTAAAAATGAGAAGAAGCTCGGGGAAATGATGGTTGATGAAAGAGTAACAGAATCTAAAAATGAGAAGGAGCTCGAGGAAATGAAGGTTGATGAAAGAGTAACAGAATCTAAAAATGAGAAGAAGCTCAAGGAAATGGCGGTTGATGAAAGAATAACAGAATCTAAAAATGAGGAGCAGCTTTTGGAGACAGTGTTGGATAATGGTGTAAGTGTAACAGAATCTAAAAATGAGAAGAAGCTCGAGGAAATGGCGGTTGATGAAAGAGTAACAGAATCCAAAAATGAGGAGCAACTTTTGGAGACGGTGTTGGATAATGGTGTAAGTGTAACAGAATCTAAAAATGAGAAGAAGCTCGAGGAAATGACGGATGATGAAAGAGTAACAGAATCCAAAAATGAGAAGAAGCCCGAAGAAATGACGGTTGATGAAAAAGTAACAGAATCTAAAAATGAGGAGCAACATGTGGAGAAAAACCAAAATGTAGATTTTTTTGAGAGTAAAAAGGGTGCTGCAACTGAGGAAGCAGGGAAGAGTGCATTGACAGAAATAATTAAGGCTAGAGGTTTATGGTGTGAGCTCTGTCAAATTGGCACTAACTCACAAACTGTGATGGAAGGGCATTTAAAAGGGAAAAAACACATTAAGAAAATGAATCAATTCAATAAAAAAAATGTAAGTCTTCCATCAACATCCTTTGTATCTTCGATCAACCAAGTATCTACTGATGGTGTTAAAAAAGAAACAGACCAAATGATGACACACATGACCAATACTAGAGATGGAATATAA 1743 0.3924 MAEQTEKTYLTNRSLHSNSLVYESASQREIEKEEIRQKILRQKELEEEVWRELAMERAFGTMQRSTLDHIGASQPSLIMPPPDIKHSTNNKDKVILLAKPDMSLYSAKRKAATQDFPSGEPSAIGMNKKLKEEWSCELCQIKATSENDLNDHLNGKKHKVREARQKREIDRHNKKSQNTVIEVTDTAVNSIISGVDAEKDQKTPNCCIVLNVMNENVVDTKSNNEEQLLETMVDNGVSVTESKNGKKLEETTVDERVTESKNEEQLLETVLDNRVSVTESKNEKKLGEMMVDERVTESKNEEQLLETVLDNGVSLTESKNEKKLGEMMVDERVTESKNEKELEEMKVDERVTESKNEKKLKEMAVDERITESKNEEQLLETVLDNGVSVTESKNEKKLEEMAVDERVTESKNEEQLLETVLDNGVSVTESKNEKKLEEMTDDERVTESKNEKKPEEMTVDEKVTESKNEEQHVEKNQNVDFFESKKGAATEEAGKSALTEIIKARGLWCELCQIGTNSQTVMEGHLKGKKHIKKMNQFNKKNVSLPSTSFVSSINQVSTDGVKKETDQMMTHMTNTRDGI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04294 580 Gene3D Classic Zinc Finger 489 537 - -
Mepo3g04294 580 Gene3D Classic Zinc Finger 125 169 - -
Mepo3g04294 580 PANTHER OS06G0651300 PROTEIN-RELATED 14 576 - -
Mepo3g04294 580 SMART ZnF_U1_5 131 165 IPR003604 GO:0003676|GO:0008270
Mepo3g04294 580 SMART ZnF_U1_5 504 538 IPR003604 GO:0003676|GO:0008270
Mepo3g04294 580 SUPERFAMILY beta-beta-alpha zinc fingers 118 166 IPR036236 -
Mepo3g04294 580 MobiDBLite consensus disorder prediction 429 474 - -
Mepo3g04294 580 Pfam Zinc-finger of C2H2 type 508 531 - -
Mepo3g04294 580 Pfam Zinc-finger of C2H2 type 134 158 - -
Mepo3g04294 580 SUPERFAMILY beta-beta-alpha zinc fingers 504 537 IPR036236 -
Mepo3g04294 580 SMART c2h2final6 507 531 IPR013087 -
Mepo3g04294 580 SMART c2h2final6 134 158 IPR013087 -
Mepo3g04294 580 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04294 Mepo-Chr3 52175506 52179094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04294 92 285 C2H2 Transcription Factor Family AT2G19380 25.238 1.68e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04294 - - mtr:25488907 822.002