Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04293 ATGGAAGAACCGATGGAGTTACAATTAGAAGACAATACAACCTCTACAGAGAAAAATAGTAAAAGAAAGCTTAAAACCCCTGCACAGCTTATGGCCTTGGAAATTTTTTATAACGAGCACAAATACCCCACAGAGGAAATGAAAGTTGAACTTGCTAGTGAACTAGCGTTGACAGAAAAGCAAATCTCGGGATGGTTTTGTCACAGAAGGTTAAAAGATAAGAGACTAATGAAAGGTGAAGTATGTGCTAATGGACGGCAAGATCGATCAAGTGGTGTTGTTCAAGACCGTGTCAGTGGACTAGGGCAAGATTCATGTGGAAGCACTAAGCATGGTGAGTACAGGTGTTTGGATCCCAAAGAGGTTGAGAGTCATGGTCTCTATAATCATGAAGTGTTAGTTGCAGATATGAAATATGTACATAGAAACCATTATACAGAAAATGATAGTGAAACGGATAACACATCACCTGAGAGTAGCTCATCTTTGCAAGAACGGTATTATCTCCAAGGACAGGGTCCATATGATATGGAGCCTTCTAGACACGCAACACCAAATGGAGCTCTTCCACCCTTAAATCCTACGGGATATAAACCATCAGGATATTTAAAAGTGAAGAAAGAGATAGAGCATGCTGCTATAACTGCTGTTAAGAATCGGTTAGGAAGGTATTTTCTGGAAGATGGCCCACTACTTAATGTAGATTTTGATACAATTCCTCCAGGGGCATTTGAATTTCAAACTGAAAATCCAGTTAATGAAACATACCATGTTGCAAACCCATCTCTTTCAAATTCTCCAGAGGACTCTGCCCCAAACAGGCAATCTTGTCTAAGCTCTAGATATGATTTATATACGAACAAATTAAGTTCCCAAGATTTACAAATGGAAGGTGGTGACTTGGGCTCCTTGCATGATTCTGATTTCCAGGATAAGAAATCCCGCCAGCTTATTCAACAAAGAACAAATTTTCAGGGTCGTCCAATTCATACCAATCATTTACCTGGCAAGAACTTTCCTGTGGATTTGAACGTAGACTCAACTGGGGAAGCACCTTCGTATAATGGCACTAGAAATCATAGAATAGGCACTAAGCATGGTGTTGAAAGGATGAGATCTGATTCTGCTTCTAATCCCAGTGATCATCGCTATCACGAGAATAACCCGGCGATTATGAAGTCAGATCCACTACTACATGGCTACAATAACGGTAATGTGAAGAATGTACAAAGGAGTGGATATATAAAATCCGAACCTTCAAATTCAATGCATAATTCTCGAATTTCTATGGATTCTGAAGAAAGAGGGCTTTCGGAAAGGATGGCAAAGGAAGAAAAGTTCAATGGGACTAGAAAGATTAAAAAAGAATATCATGAGTCAGATGGAGTAAGAATGCCTTCGAGAGAAACTGTGGTTGCAAAGCGAGCTAAATTTGATTTACTTCATCAACATGATATTAAACAAGCACCTGTTGCTGAGATTGAACCAAGGAAAACTCAGAGATCTGCTGTGGAGTTGCCATCTAGCTTTAGTGAGGATGATGAAACTGCTGAAACCAGTTCCTCCCTGGGTTGA 1575 0.3981 MEEPMELQLEDNTTSTEKNSKRKLKTPAQLMALEIFYNEHKYPTEEMKVELASELALTEKQISGWFCHRRLKDKRLMKGEVCANGRQDRSSGVVQDRVSGLGQDSCGSTKHGEYRCLDPKEVESHGLYNHEVLVADMKYVHRNHYTENDSETDNTSPESSSSLQERYYLQGQGPYDMEPSRHATPNGALPPLNPTGYKPSGYLKVKKEIEHAAITAVKNRLGRYFLEDGPLLNVDFDTIPPGAFEFQTENPVNETYHVANPSLSNSPEDSAPNRQSCLSSRYDLYTNKLSSQDLQMEGGDLGSLHDSDFQDKKSRQLIQQRTNFQGRPIHTNHLPGKNFPVDLNVDSTGEAPSYNGTRNHRIGTKHGVERMRSDSASNPSDHRYHENNPAIMKSDPLLHGYNNGNVKNVQRSGYIKSEPSNSMHNSRISMDSEERGLSERMAKEEKFNGTRKIKKEYHESDGVRMPSRETVVAKRAKFDLLHQHDIKQAPVAEIEPRKTQRSAVELPSSFSEDDETAETSSSLG 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04293 524 SMART HOX_1 18 80 IPR001356 GO:0003677
Mepo3g04293 524 CDD homeodomain 21 75 IPR001356 GO:0003677
Mepo3g04293 524 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Mepo3g04293 524 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Mepo3g04293 524 Gene3D - 10 91 - -
Mepo3g04293 524 MobiDBLite consensus disorder prediction 415 440 - -
Mepo3g04293 524 MobiDBLite consensus disorder prediction 502 524 - -
Mepo3g04293 524 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Mepo3g04293 524 MobiDBLite consensus disorder prediction 1 23 - -
Mepo3g04293 524 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 523 - -
Mepo3g04293 524 MobiDBLite consensus disorder prediction 490 524 - -
Mepo3g04293 524 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04293 Mepo-Chr3 52168656 52174116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04293 6 523 Homeobox Transcription Factor Family AT4G03250 39.122 1.18e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo3g04293 Homeodomain 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04293 - - mtr:25488906 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04293 3 52168656 52174116 Mepo3g04293 3 52168656 52174116 ECH