Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04273 ATGATGGTTTTATTGACTTGCATTATTATTGTTCTTGTTTTGAATGGTGCCACTGCTGCCACAGATCCAACTGATGTTGCCTCTGTAAATGCTATATTTCAAAGCGTAAATTCAGCACCTCAACTTGGTTGGCCTGCTACTGCTAACGGTGATGATCCATGTGGTCAGTCTTGGAAAGGCATTACTTGTTCAGACAACCGTGTTACTCAAATTAATTTATCCAATCTTGCTCTTACTGGAACATTGCCTTATGGATTACAGGGCTTCACATCTCTCACCATTCTAGACATGAGTAACAATAATCTTGTTGGTACTATACCATACCAACTTCCTCCAAATCTACACCGCTTAAATTTTGCTCATAATAACTTCACTGGCCCACTCCCTTACTCTATTTCTAACCTCACCTCTCTCACAGACCTGAATCTCAATCACAATCAGCTCCAGCAAGCACTCAATGTCAACTTTCATAATTTGTCTACTCTCTCCAAATTAGACCTCTCTTTCAATTCTTTGACTGGTGACCTCCCTCAGACTATGAGCTCACTAACAGGCATAACCACCATGTATCTGCAAAACAACCAATTTACAGGCGCTATTGATATTCTTGTTGATCTGCCTCTGAATAGTCTGAATGTAGAAAACAATAATTTCACTGGATGGATACCGGAGCAGTTGAAAAACATAGACCTTCAGACGGGTGGTAATGAATGGAGCTCAGGACCTGCACCACCACCTCCTCCTGGGACACCTCCAGTACCTAAAAGCAACCAACACCACAAATCTGGTGGTGGAAGAAGTACCACTGGACAAGATGTCAACAGTGACACAAGCAATGAAGGCAAAAAATCTGGAATAGGAGGTGGTGGCATAGCTGGAATTGTGATCTCCGTCATTGTTGTTGGGGCAATTGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTTCCGATTTAGAAAAACTGGGGAATCAGTCTACCATTCCTCTTCCTTCAAATGAAGTGCCTGAAGTTACATCTGTGCAGACTTCTCCTGCATTTGGCTTGAAGAAGTTTGACACTTCTGCCTCAATAAATCTCAAACCCCCACCTATCGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAAAAGCCCACTATTGTCAAGAAGACTATAACAGCTCCTCCAGATTTGCAATCATATTCTATAGCCGATCTTCAAATTACTACTGGCAGCTTCAGTGTGGATCATCTCGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCATGCTCAATTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCTAATGATTTTTCAGAAGATTTTATAGAAACAGTGTCAAACATCTCCCGTTTACATCATCCAAATGTAACTGAGCTTGTAGGTTATTGCTCGGAGCATGGACAACACCTCTTAGTTTACGAGTTTCATAAAAATGGATCACTGCATGACTACCTTCATGTGTCAGATGAATACAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGGACTGCACGTGCTTTAGAGTACTTGCATGAAGTTTGTTCTCTATCAGTTGTGCATAAGAATATTAAGTCAGCCAATATACTACTTGATGCAGAGCTTAATCCTCATCTTTCAGACTGTGGATTGGCAAGCTATATTCCAAATGCAGAGCAGATACTAAACCATAATGTTGGATCTGGATATGATGCACCCGAAGTTGCGTTGTCTGGTCAGTATACCTTTAAAAGTGATATCTACAGCTTTGGGGTTGTCATGTTGGAGCTTCTGAGTGGACGCAGACCATTTGATAGCTCAAGGGCAAGACAAGAGCAGTCTTTGGTTCGATGGGCAACACCCCAGCTTCATGACATTGATGCATTGGCTAAAATGGTTGATCCTACGCTGAAAGGGTTATATCCTGTTAAATCTCTATCACGTTTTGCTGATGTTATTGCTCTTTGCGTACAGCCGGAGCCTGAATTTCGACCACAAATGTCAGAGGTGGTTCAAGCACTGGTACGATTAGTGCAGCGAGCTAACATGAGCAGACGGACATTCACATTTGGAAGTGATCATGGAGGATCCCTGCGAGGAAGTGATGAGTCAGCTATACGAGATATCTAA 2154 0.4188 MMVLLTCIIIVLVLNGATAATDPTDVASVNAIFQSVNSAPQLGWPATANGDDPCGQSWKGITCSDNRVTQINLSNLALTGTLPYGLQGFTSLTILDMSNNNLVGTIPYQLPPNLHRLNFAHNNFTGPLPYSISNLTSLTDLNLNHNQLQQALNVNFHNLSTLSKLDLSFNSLTGDLPQTMSSLTGITTMYLQNNQFTGAIDILVDLPLNSLNVENNNFTGWIPEQLKNIDLQTGGNEWSSGPAPPPPPGTPPVPKSNQHHKSGGGRSTTGQDVNSDTSNEGKKSGIGGGGIAGIVISVIVVGAIVAFFLVKRKSKKSSSDLEKLGNQSTIPLPSNEVPEVTSVQTSPAFGLKKFDTSASINLKPPPIDRHKSFDDNEFSKKPTIVKKTITAPPDLQSYSIADLQITTGSFSVDHLVGEGSFGRVYHAQFDDGKVLAVKKIDSSVLPNDFSEDFIETVSNISRLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDYLHVSDEYSKPLIWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDAELNPHLSDCGLASYIPNAEQILNHNVGSGYDAPEVALSGQYTFKSDIYSFGVVMLELLSGRRPFDSSRARQEQSLVRWATPQLHDIDALAKMVDPTLKGLYPVKSLSRFADVIALCVQPEPEFRPQMSEVVQALVRLVQRANMSRRTFTFGSDHGGSLRGSDESAIRDI 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04273 717 MobiDBLite consensus disorder prediction 232 286 - -
Mepo3g04273 717 Gene3D Transferase(Phosphotransferase) domain 1 489 700 - -
Mepo3g04273 717 Gene3D Phosphorylase Kinase; domain 1 372 487 - -
Mepo3g04273 717 SUPERFAMILY L domain-like 28 228 - -
Mepo3g04273 717 SUPERFAMILY Protein kinase-like (PK-like) 392 682 IPR011009 -
Mepo3g04273 717 Pfam Protein tyrosine and serine/threonine kinase 413 682 IPR001245 GO:0004672|GO:0006468
Mepo3g04273 717 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 69 683 - -
Mepo3g04273 717 MobiDBLite consensus disorder prediction 255 282 - -
Mepo3g04273 717 CDD STKc_IRAK 416 685 - -
Mepo3g04273 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 696 - -
Mepo3g04273 717 MobiDBLite consensus disorder prediction 697 717 - -
Mepo3g04273 717 MobiDBLite consensus disorder prediction 240 254 - -
Mepo3g04273 717 MobiDBLite consensus disorder prediction 321 339 - -
Mepo3g04273 717 Gene3D Ribonuclease Inhibitor 23 244 IPR032675 -
Mepo3g04273 717 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04273 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 374 487 - -
Mepo3g04273 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 22 249 - -
Mepo3g04273 717 PRINTS Leucine-rich repeat signature 159 172 - -
Mepo3g04273 717 PRINTS Leucine-rich repeat signature 92 105 - -
Mepo3g04273 717 MobiDBLite consensus disorder prediction 318 339 - -
Mepo3g04273 717 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04273 Mepo-Chr3 51749946 51757085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04273 1 695 Strubbelig Receptor Gene Family AT1G53730 63.818 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo3g04273 Pkinase 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04273 - - psat:127132034 1153.66