Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04266 ATGGAACAAGTGAAAGGGTATTGTTCTGATAGCAGGGACGAAGAGGAGGAAGAGGAAGGTGCAGATGATATAATCGCAATCACTGGAGGAGGAGAAGAAAGCAGCAGCAGCAGGTTACAGTTACAAGAGACGTCACAGCAGGAAGAAGAAGAAGAAGAAAAAGATGCGGGGCTTGGGAAGTTGAATGAAGAGGAGGTAGATTTGATGGAGTTAAGACTTGGAGGAGGGGGAAGCAAGAGCAAGGGCAGTGATGAAGGATTAGGAATAGGATGTTCTTCAAATTCAAAGGATGAGGAGGAGGAGGCAGTAGCAGTAGCAGTAGTAGTAGAGAAAGAGCATATGTTTGACAAAGTGGTGACACCTAGTGACGTAGGGAAGCTGAATCGACTTGTGATTCCAAAACAGCACGCAGAGAAGTACTTCCCTTTGGATTCTTCTACCAACGAGAAAGGGCTTCTCCTAAATTTTGAAGATCGAAATGGTAAGATGTGGCGGTTCAGGTATTCTTATTGGAACAGTAGCCAGAGTTATGTGATGACAAAAGGGTGGAGCCGTTTTGTTAAGGAGAAGAAACTTGATGCTGGTGACATTGTTTCATTCCACCGTGGACGTGCTGAATTGTACAGACACAGGTTGTACATAGATTGGAGGCCAAGGGCTCATTCTCAGTACTCTCATCATCATCACCACCACCTCATCCCTCAATATCCTCCTCCACTTCCTTTCTATCTTCCTCCCAATCATCACTATTCATCGTATGCTGCTACTGCTAGACCATTATACACCTCCCCCCAATATTCCCACCTCCCTAATCCTAATACTAATTACGTTTCCCCTTCTACAATACCTCACCCTCAATATTACAACAGCAATTTCTATACTACTACTACACTTCATCAACAACAACAACAGTACCACCACCCTTCTGCTACGGCTGATCACCTTGTTAATAATAACAACATGAATCCTCTCTATTATCTCACCTCATCGCCAATTACGCCACCATCAACAACCACAACTGGTGGTGGTGGTGGTGATCAACATTTTCAGGGATCCGTGGTGCAAGGGCACCAACAAGACCAGAGAAATGTGAATGTCCCTATGAATATGATAATTGATTCAGTGCCAGTTGCACATCATCACCGCAGAGGCAATGTTAATACCAGCGGAAAACGGCTGAGACTATTTGGGGTTAACATGGAATGTGATTCTTCTTCTCCAGCACCACCACCACCACCACAGCCGACAACAACTTCTGTGGATCATGATCATCATCACAGAGGGGGAACTTCGCTGCACTTTGATTTGGATCCTTCTAATTCCCAATATCGCCGGAACCACTGA 1344 0.4494 MEQVKGYCSDSRDEEEEEEGADDIIAITGGGEESSSSRLQLQETSQQEEEEEEKDAGLGKLNEEEVDLMELRLGGGGSKSKGSDEGLGIGCSSNSKDEEEEAVAVAVVVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGRAELYRHRLYIDWRPRAHSQYSHHHHHHLIPQYPPPLPFYLPPNHHYSSYAATARPLYTSPQYSHLPNPNTNYVSPSTIPHPQYYNSNFYTTTTLHQQQQQYHHPSATADHLVNNNNMNPLYYLTSSPITPPSTTTTGGGGGDQHFQGSVVQGHQQDQRNVNVPMNMIIDSVPVAHHHRRGNVNTSGKRLRLFGVNMECDSSSPAPPPPPQPTTTSVDHDHHHRGGTSLHFDLDPSNSQYRRNH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04266 447 FunFam B3 domain-containing protein 108 230 - -
Mepo3g04266 447 SMART B3_2 115 220 IPR003340 GO:0003677
Mepo3g04266 447 MobiDBLite consensus disorder prediction 1 95 - -
Mepo3g04266 447 Pfam B3 DNA binding domain 115 204 IPR003340 GO:0003677
Mepo3g04266 447 SUPERFAMILY DNA-binding pseudobarrel domain 112 206 IPR015300 -
Mepo3g04266 447 Gene3D - 108 231 IPR015300 -
Mepo3g04266 447 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 15 411 IPR044800 GO:0003700
Mepo3g04266 447 MobiDBLite consensus disorder prediction 400 447 - -
Mepo3g04266 447 CDD B3_DNA 113 206 IPR003340 GO:0003677
Mepo3g04266 447 MobiDBLite consensus disorder prediction 332 358 - -
Mepo3g04266 447 ProSiteProfiles B3 DNA-binding domain profile. 115 215 IPR003340 GO:0003677
Mepo3g04266 447 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04266 Mepo-Chr3 51646103 51647839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04266 93 405 RAV Transcription Factor Family AT2G46870 46.012 8.91e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g04266 B3 1.1e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04266 K09287 - psat:127132047 456.447