Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04262 ATGGATGCAGCTGCAGCAGCAGCATACTCCTCTGGAGAAGACTTCGTTCTCAAGACAAGAAAGCCATATACTATCACAAAACAAAGAGAACGATGGACAGAAGACGAACATAATCGATTTCTAGAAGCCCTCAAGCTATATGGCCGAGCATGGCAGCGTATAGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCCCAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCACTTGTAAAAGGTGCTGCATTAGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGCAAGACCAATGTCGGTACCCCAACATTACATAGTGGAGCAAAGTATGGAAAGCCACTTATTGCAATTGCATCTTCACATGGTAAACAAGCAATGGATTTTGAGAAAGAATCACTTCCAGAGGAGCATAAAGATGAGGAAAGGCCAACGACGGTAAAAGAAAATAACGATGAAAATTGCTTAAAAGTATTAACAATCCTCAAGGAGGCACCCTGTTCATCTGTATCTTCGGCAATCAAGAGTTCAATCTCAATGTCAGTGCCACAGACAAATTCCTGCACCATCAGGGGGTTTACACCTTCAGTGAAAGAGGTAATAACACGAGATGAAACAAATGAATCTTTTCCTACTACTGAGATTGAAAACCAGATGTTGAAGATAGATGATGCCAAACACACACAAAAAAATGATGGCATTTGTCGAACCTCTAAGTTGGAGAATTGTTCTCCTAAATCGGTTCAATCCGAGAAAACAGATGGTCTTACTTCTGCGATAACAATTGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCACGTTGTTGATGGGAACTTTGGAACTAGTACTCAAAGTCCATCACAAAATATGTTGATTCAAGACTCCACATTTCAGCCAATAGGAGGGATTAATGTGCAGCCTAATCTCTTCGCAAATCCAGCTGCATCAAACACAAGTGAAAATCAAAATAACATGGCACGATCCTCTAGTCATCAATCATTTCCTCCTTGTCCTCCATTTGCACATAACCATGCTGATTACCAATCCTTTCTCAACGTGTCTTCTACATTTTCAAGTCTTATTGTCTCTACCTTGCTGCAACACCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCGTATGCAAATGTAGAATCTTCAGCTGATTCTCCTTCTTGCTCTCAAGGAGGTTTCCCATCTAGACAAATTGGTTCACCTCCTAGTGTAACAGCTATTGCAGCTGCTACAGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGACTGCTTCCTGTGTGCGCTCCGCTCCAGACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTAGCTCCATCAACAAATATTAGTAAAGAACCACCTAAGACAGATCAAGGAGATATTACACTACAAAATCCTCCTCTGCAAGATCAGTTACTAGATCCAGAAAACTCGGAAGCTATGCAAGCTCAACATTCAGGTTCTAAGACACCAGTTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATGCTAAGTTAAATACTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAATTTCTGAGAACCCTGATTCCAACAAAATGGAGGGCAGAAAACTGATAGACCGGTCTTCTTGTGGTTCCAACACAACCTCTAGCTGTGAAGAGACTGATGCGCTAGAGAAGGATGAGAAAGAAAAGGAAGAATCTAAAATACCTGATGCGGACCATTTAGCTACTGATCCTAGTAGTCGTCGATATAGAAGCATTAGCAACCTTCTTGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGACTTGCCTTTCGAGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCATGATTTGATAAATAAGGATAATCAGATGGACAACATGAAGGATAACGAGCAAAAAACAGACCACAAAGATCACCTTGAGAGCAAGAAATGCATTTGTAATTGTGACCAGGCACAGCAAAACCTACCATTTGTACAAAATAACAATGAGGAGGGATTTCTAACCATGGGTCTTGGACAAGGTAAGCTTAAGACTCGTCGAACCGGGTTCAAGCCTTACAAAAGATGTTTAGTAGAGGCCAAGGAAAACAGGGGCGGAACGGCTTGCAACCAAGTTGAAGAGACGGGTCCCAAGAGGATACGCCTGGAAGGGGGGACTTCTATTTGA 2274 0.427 MDAAAAAAYSSGEDFVLKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSGAKYGKPLIAIASSHGKQAMDFEKESLPEEHKDEERPTTVKENNDENCLKVLTILKEAPCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDDAKHTQKNDGICRTSKLENCSPKSVQSEKTDGLTSAITIDEMQSNQNYPRHITVHVVDGNFGTSTQSPSQNMLIQDSTFQPIGGINVQPNLFANPAASNTSENQNNMARSSSHQSFPPCPPFAHNHADYQSFLNVSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPSCSQGGFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPVCAPLQTAFACPPASTTVAPSTNISKEPPKTDQGDITLQNPPLQDQLLDPENSEAMQAQHSGSKTPVVSSSESEESGDAKLNTSSKATINLDINQPISENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEESKIPDADHLATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKDNQMDNMKDNEQKTDHKDHLESKKCICNCDQAQQNLPFVQNNNEEGFLTMGLGQGKLKTRRTGFKPYKRCLVEAKENRGGTACNQVEETGPKRIRLEGGTSI 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04262 757 Gene3D - 31 78 - -
Mepo3g04262 757 Pfam Myb-like DNA-binding domain 29 72 IPR001005 -
Mepo3g04262 757 SMART sant 28 76 IPR001005 -
Mepo3g04262 757 FunFam protein REVEILLE 6 isoform X1 31 79 - -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 581 608 - -
Mepo3g04262 757 SUPERFAMILY Homeodomain-like 23 79 IPR009057 -
Mepo3g04262 757 ProSiteProfiles Myb-like domain profile. 24 74 IPR001005 -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 139 163 - -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 332 356 - -
Mepo3g04262 757 ProSiteProfiles SANT domain profile. 27 78 IPR017884 -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 470 608 - -
Mepo3g04262 757 NCBIfam myb-like DNA-binding domain, SHAQKYF class 27 76 IPR006447 GO:0003677
Mepo3g04262 757 MobiDBLite consensus disorder prediction 140 163 - -
Mepo3g04262 757 CDD SANT 31 74 IPR001005 -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 470 556 - -
Mepo3g04262 757 PANTHER SWI/SNF COMPLEX-RELATED 12 641 - -
Mepo3g04262 757 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 78 IPR017930 -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 92 123 - -
Mepo3g04262 757 MobiDBLite consensus disorder prediction 332 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04262 Mepo-Chr3 51579876 51588742 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g04262 Myb_DNA-binding 8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04262 K12133 - gmx:778086 984.941