Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04260 ATGGCCCCTCCTTCAACAGAATCTAATCAACCACTTGCTAATGGTAAAGAAAAACAAGTTGTTAAACCAGAAGAAGAAGAAGATAACAATGCCCTCGAATTTTGCACACAACTAACAGGTTCAATTGTTGTTCCATTGGCTTTGAGGTCTGCTATTGATCTTGGGATCTTTGACATCCTAGCCAAAGCTGGTAATGGTGCAGAACTCTCTGCACATGACATTGCTGTTAAGATTGGAACCAAAAACCCAGAAGCAGCAACCATGTTGGATCGTCTTCTTAGGTTGTTGGCAAGTCACTCTATTCTAAACTCCTCTGTTCCTCAACATCCTCAAAGCCTTGAGAGATTCTATAGCCTCTCCAATCACTCCAAATATTTTGTCACTGATGCTGATGGTGTCTCTTTGGGACCCACCTTGGCATTACTTCTGGACAACGTCTTCTACCAAAGCTGGTCGGAGTTGAAAGGAGCTATCATGGAAGGAGGAATACCATTCAATAGGGTTTATGGAATGCATGCATTTGAGTATCCACGTGTGGACCCAAGGTTCAATGATGTTTTCAACAAAGCTATGGTTAATTCAACAACTATAAACATGAAGAGGATTATTGATTGTTATCAAGGTTTTGAGCACGTAACTAAGCTAGTTGACGTTGGTGGTGGTCTTGGAATTAACCTCAAATTAATCACATCCAAATATTCACATATTCAAGGAATTAATTTTGACTTGCCTCATGTACTACAACATGCCCCTGTCTACCCAGGTGTGGAACATGTGGGGGGAGATATGTTTGAGAGCGTCCCTGCAGGGGATGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAACATTGCTTGAAGCTGTTGAAAAATTGTTACAAAGCTATTCCTGAGGATGGAAAGGTTATTGTGGTGGACACAATCCTTCCTGTTATGCCAGAGACAACAGCCAATGCAAAGTCTGCTTGCATGTCTGATGTTTTAATGATGACTCAAAATCCAGGAGGAAAAGAGCGAACTGAGCATGAATTCAAGGAATTGGCAAAAGGATCTGGATTTAGTGGCATCAAACCTATATGCTGTGTATCTGGATTGTGGGTTATGGAGTTCTTTAAATAG 1125 0.4116 MAPPSTESNQPLANGKEKQVVKPEEEEDNNALEFCTQLTGSIVVPLALRSAIDLGIFDILAKAGNGAELSAHDIAVKIGTKNPEAATMLDRLLRLLASHSILNSSVPQHPQSLERFYSLSNHSKYFVTDADGVSLGPTLALLLDNVFYQSWSELKGAIMEGGIPFNRVYGMHAFEYPRVDPRFNDVFNKAMVNSTTINMKRIIDCYQGFEHVTKLVDVGGGLGINLKLITSKYSHIQGINFDLPHVLQHAPVYPGVEHVGGDMFESVPAGDAIFMKWILHDWSDEHCLKLLKNCYKAIPEDGKVIVVDTILPVMPETTANAKSACMSDVLMMTQNPGGKERTEHEFKELAKGSGFSGIKPICCVSGLWVMEFFK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04260 374 MobiDBLite consensus disorder prediction 1 15 - -
Mepo3g04260 374 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Mepo3g04260 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 372 IPR029063 -
Mepo3g04260 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 374 IPR016461 GO:0008168
Mepo3g04260 374 MobiDBLite consensus disorder prediction 1 27 - -
Mepo3g04260 374 PIRSF O-mtase 13 374 IPR016461 GO:0008168
Mepo3g04260 374 Gene3D - 13 126 IPR036388 -
Mepo3g04260 374 PANTHER O-METHYLTRANSFERASE 38 355 IPR016461 GO:0008168
Mepo3g04260 374 FunFam Caffeic acid 3-O-methyltransferase 13 126 - -
Mepo3g04260 374 Pfam Dimerisation domain 47 97 IPR012967 GO:0046983
Mepo3g04260 374 FunFam Caffeic acid O-methyltransferase 127 374 - -
Mepo3g04260 374 SUPERFAMILY "Winged helix" DNA-binding domain 26 129 IPR036390 -
Mepo3g04260 374 Gene3D Vaccinia Virus protein VP39 127 374 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04260 Mepo-Chr3 51550108 51552541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04260 21 374 Monolignol Biosynthesis Gene Families AT5G54160 53.521 2.11e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04260 K13066 - gmx:100789402 514.227