Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04255 ATGGCTGCCAACTCTGCTACTCGGTCTTTCTCCTCTTCCTCTACGTTACTTTACCATAAGCAGCCACTACTTGGAGTTGGAGTTGGATACTCAAAAGGATTCGTTTCGTTTTCTGCGCTGCCTTATCCTTGTTTCTCCTCACGTCACAGCACGTCAATTGTAGAAAACGAAGAACAACCACCATGGAAGAATCTGGGAAATCCAGCCCAAGTTTACGTCTGCAACCTTCCTAGAAGCTGTGATACTCAACACCTACTTCATCTCTTCACTCCTCACGGAACCGTTCTATCTACCGAGGTTTGCCGAAACGCAGAGACTGGTGAGAGTAAAGGGAGTGCTTATGTCACAATGGGATCTTATAATGCTGCTAAAAATGCACTTGCTGCATTGGATGGATCGGATGTTGGTGGGCGCGAAATGCGGGTTAAATTTTCTGTTGAGATGAATACTAACAACAAGAATTTAGAGACATTGAACTCACCTCCCGTGAGAAGAACTATATACTATGAAGGTCCTCATAAGGTGTATGTTGGGAATCTTGCCAAGTTTGCTACACCTGAAGATGTGAGACATCTCTTTGGTAAATTTGGAAATGTGGCTAGCGTGAGGGTGTTGCAAGATTTCAAACAGGGGAAAAGCCGTGTCTATGCCTTTGTCTCTTATCTCTCTCAAAGAGAACGTGACGCCTCTATGTCCCTCAATGGAACCGAACTTTGTGGTCGAACTCTGGTGGTTAGAGAGGGTGTGGAGAAGACTGAGACTTAA 765 0.4497 MAANSATRSFSSSSTLLYHKQPLLGVGVGYSKGFVSFSALPYPCFSSRHSTSIVENEEQPPWKNLGNPAQVYVCNLPRSCDTQHLLHLFTPHGTVLSTEVCRNAETGESKGSAYVTMGSYNAAKNALAALDGSDVGGREMRVKFSVEMNTNNKNLETLNSPPVRRTIYYEGPHKVYVGNLAKFATPEDVRHLFGKFGNVASVRVLQDFKQGKSRVYAFVSYLSQRERDASMSLNGTELCGRTLVVREGVEKTET 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04255 254 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 173 250 IPR000504 GO:0003723
Mepo3g04255 254 SMART rrm1_1 174 246 IPR000504 GO:0003723
Mepo3g04255 254 SMART rrm1_1 70 143 IPR000504 GO:0003723
Mepo3g04255 254 SUPERFAMILY RNA-binding domain, RBD 56 152 IPR035979 GO:0003676
Mepo3g04255 254 Gene3D - 165 253 IPR012677 -
Mepo3g04255 254 PANTHER OS02G0815200 PROTEIN 56 246 - -
Mepo3g04255 254 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 141 IPR000504 GO:0003723
Mepo3g04255 254 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 175 243 IPR000504 GO:0003723
Mepo3g04255 254 FunFam 30S ribosomal protein 2, chloroplastic 160 248 - -
Mepo3g04255 254 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 147 IPR000504 GO:0003723
Mepo3g04255 254 Gene3D - 46 157 IPR012677 -
Mepo3g04255 254 SUPERFAMILY RNA-binding domain, RBD 168 251 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04255 Mepo-Chr3 51520529 51521864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04255 33 253 Eukaryotic Initiation Factors Gene Family AT1G22760 27.477 9.07e-16 74.7