Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04243 ATGGGAAGTGGTGAGAGAAGTTTCAAAGGATTTCTTCTGCATGGGAAGAAGCAAGAGTTCAGAGGTGTACCAAAAGGGTGTCTTGCAATCAAGGTTGGTCAAGGAGAAGATCAACAAAGGTTCGTGGTTCCAGTGATTTACTTCAATCACCCACTCTTCATGCAGCTTCTGAAAGAGGCAGAAGAAGAATATGGTTTTGATCATAAAGGAGCCATAACCATCCCTTGTCGTGTTGAGGAGTTCAGAAACATAAGAGGTTTGATTGATAGGGAAAAGTCTCTTCATCACAATCATCATGTTGGATGCTTTGGTTTCTGA 318 0.4182 MGSGERSFKGFLLHGKKQEFRGVPKGCLAIKVGQGEDQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDHKGAITIPCRVEEFRNIRGLIDREKSLHHNHHVGCFGF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04243 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 83 IPR003676 GO:0009733
Mepo3g04243 105 Pfam Auxin responsive protein 21 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04243 Mepo-Chr3 51414797 51415586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04243 23 89 Calmodulin-binding Proteins AT3G43120 52.239 5.20e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04243 K14488 - pvy:116108881 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04243 3 51414797 51415586 Mepo1g03967 1 46094895 46095693 PCT