Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04223 ATGGACTCTTCTTCCTGCGACCGTCCTAAAGCGGCGGCGATGCGAGCCAACGTCGCCGGAGAGAACCACATACCGCGGTTTATGAATCAATTCAACAGCAAAATTGAAGATGCAGAGTCTAACAATAGGAAGAGGAAGATCGTCGCTGTCACCGATCTCTGTAACAGATCGGAGTCGGAGCTGAATGGAAACTCCACGAGAAAGAAGATGAAACCGATTCATCAAGAGAAGGAAGGTGATTTTGGCAAGGGACTAATGGATGTGTATAAGGTCAACAAACCCAAAAATGGAATTGAAGATACCAAACAACAGGAAAAGGAAGGTAGCTGTAACAAGGTTAACAAAGCCAAAAATGGAGTCGCAGATACTAAACAACGGGGTATATCCAAAAAAGCCAAGAAGGGTGAAAGTTTGATGTGTCATCAGTGCCAGCGGAATGATAAGAGTGGTGTTGTCTTTTGCTCAAGTTGCAACAGAAAGCGCTATTGTTACGAATGCATTGAGAACTGGTACCCAGGAAAAACCCGAGAGGAATTTGAGAACGTGTGTCCATTTTGTCTGGGTAATTGTAACTGCAAAGCTTGCTTACGGGAGTTTCCTGTGCTGATGGACCGAGAGATAGACGCCAGTGTCAAATTACAGCGGCTGCTGTACTTGCTATCTAAAGCCCTGCCAATTCTGAGGCATATCCACCGGGAACAGAGCTTGGAACTAGAGACTGAAACCAAAATAAGGGGTAAGGAACTACAAGAAATTGACATAACAAGAACAAAGCTAGATGAAAGTGAACGCTTGTACTGTGACAATTGCAATACATCCATATATGGATTTTACCGTAGCTGCCCCAACACCGGTTGCTCTTATGATCTCTGTCTCGTGTGCTGTCAAGAGCTCAGAAAGGGCTGCCAACCTGGAGGTATGGAGGCTGGAACATCTCATGAAAAATTTGAAGAGATTTTTCACCATCACAGTTCAACAAAAAATCGGAGTAAAATACATCGTAAAAGATATGACTGGGAGAGCGAACTTGCACCTACTAGTTTTCATTCTCAGGCTGACTTCTCTCCCTTCCCAGAATGGAAAGCTAATAGTGATGGTAACATTCCGTGTCCTCCAAAGCAGCGTGGAGGTTGTGGTACAGCATTACTAGAACTGAGACGCATTTACAAAGCTAATTGGGTAGCAAAACTACTAAGTAATGCTGAGGATCTCACTAGAAATTACACACCACTGGATGTGGATATTACTGAAAAGTGTTCTTCTTGCCAGCTAAACTTGTTAGAAGGAAAAATCAATCCTGAAGTCAGGAGGGCAGCATTCCGGGATGACAGTAAAGATAACTTCTTATATAGTCCAAACGCCCTTGACATATCTGATGATGAGATCGAGCACTTCCAGAGGCACTGGATGAGGGGAGAACCTGTGGTGGTGAGAAATGTTTTGGCCAAAACATCTGGTCTAAGTTGGGAACCAATGGTTATGTGGAGGGCCCTCAGAGAAACAGGTTCCAAAGCGAAGTTCAAAGAGGAAACACAAAGTGTTAAGGCTGTTGATTGCTTGGATTGGTGCGGGGTTGAAATTAATATACACCAACTTTTTCAAGGCTACGTAAAGGGTCGAATGCATAAAGATAAGTGGCCAGAAATGTTGAAATTGAAAGATTGGCCTTCATCCACCTCTTTTGAAGAGCGCTTGCCTAGGCATGGTGCTGAATTCCTTGCTGCACTTCCGTATATGGACTACACTGATCCAAAATCAGGTCTTTTAAATTTCGCTAGTAAACTTCCTGCTGGCTCGTTGAAACCAGATTTGGGACCCAAAACATATATTGCTTATGGATTTTCTGAAGAGCTTGGCCGAGGAGATTCTGTGACCAAACTGCACTTGGATGTGTCTGATGCGGTGAATGTGCTGACACACACAAACAAGGTGAATATAGCTCCCTGGCAAAGAGAAAGCATAAATAAATTGAAGAAGGGATACGATAAAGAAGACTATCCTGAACTTTATTGTGAAGCTTCAGCCAATTTTGATGGAAAATCTAAATCTAAAGCATTGGACCATGATCAAAAGGCAGAGAATGGAGTTAACCGGATTACACAAAGTAACCAAGCAGATCAGTGCATTTCATCAATGTCCGAAGACTGGTGTGGAAAGTTAGAATCACGGAACAGAAAACAATGTGATGATAACGGAAAGGGTTCTTGCACTTACAGAGATGTTGCTGTAAGGAACTCCTCTGTGGAAGATAGTGTTAGTAAAACATCATCTACCGAAGTTTTAGATTTTTCCAGGTCTTCCAAACTAGAACATGTTCAACCTGAAACCAGCTTAGCATCAACTAAGGCAGAGATAAAGAAAGACAGAATGAGGATTAATTTTTCAGATGGTAATGTGTCTAGTGATCCCAAGATAGAGTCAAAACAAGGCATGGGGAAAGATTCTTTGGACATTGATAATGGGGCTGAGGCTGTCCTTGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCAAAGTTAATTGAGTACTTGAGAAAGCACAAGAAGGAATTTCGTCATATCAACAATGAACCTGTTGATTCAGTTATTCATCCTATTCATGATCAGACTCTATTCTTAAATGAGAGGCATAGGAAACGGCTAAAAAAAGAATTTAACGTTGAACCATGGACTTTTGAGCAACACCTTGGTGAGGCTGTTTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAATAGACAGTCTTGTATGAAGGTTGCGCTTGACTTTGTTTCTCCAGAAAATGTTGAAGAATGTTTACGGCTAACTGAAGAGTTTCGTTTACTCCCGAAGTACCACAGGGCCAAGGAGGACAAATTGGAGGTTAAAAAGATGACCCTTTATGCTGTAAGTAGTGCTGTTAGACAAGTCAAAGAACTGACTATGGCCAATGAGTAA 2943 0.4244 MDSSSCDRPKAAAMRANVAGENHIPRFMNQFNSKIEDAESNNRKRKIVAVTDLCNRSESELNGNSTRKKMKPIHQEKEGDFGKGLMDVYKVNKPKNGIEDTKQQEKEGSCNKVNKAKNGVADTKQRGISKKAKKGESLMCHQCQRNDKSGVVFCSSCNRKRYCYECIENWYPGKTREEFENVCPFCLGNCNCKACLREFPVLMDREIDASVKLQRLLYLLSKALPILRHIHREQSLELETETKIRGKELQEIDITRTKLDESERLYCDNCNTSIYGFYRSCPNTGCSYDLCLVCCQELRKGCQPGGMEAGTSHEKFEEIFHHHSSTKNRSKIHRKRYDWESELAPTSFHSQADFSPFPEWKANSDGNIPCPPKQRGGCGTALLELRRIYKANWVAKLLSNAEDLTRNYTPLDVDITEKCSSCQLNLLEGKINPEVRRAAFRDDSKDNFLYSPNALDISDDEIEHFQRHWMRGEPVVVRNVLAKTSGLSWEPMVMWRALRETGSKAKFKEETQSVKAVDCLDWCGVEINIHQLFQGYVKGRMHKDKWPEMLKLKDWPSSTSFEERLPRHGAEFLAALPYMDYTDPKSGLLNFASKLPAGSLKPDLGPKTYIAYGFSEELGRGDSVTKLHLDVSDAVNVLTHTNKVNIAPWQRESINKLKKGYDKEDYPELYCEASANFDGKSKSKALDHDQKAENGVNRITQSNQADQCISSMSEDWCGKLESRNRKQCDDNGKGSCTYRDVAVRNSSVEDSVSKTSSTEVLDFSRSSKLEHVQPETSLASTKAEIKKDRMRINFSDGNVSSDPKIESKQGMGKDSLDIDNGAEAVLGGAVWDIFRRQDVPKLIEYLRKHKKEFRHINNEPVDSVIHPIHDQTLFLNERHRKRLKKEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCMKVALDFVSPENVEECLRLTEEFRLLPKYHRAKEDKLEVKKMTLYAVSSAVRQVKELTMANE 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04223 980 SMART cupin_9 565 942 IPR003347 -
Mepo3g04223 980 ProSiteProfiles Zinc finger RING-type profile. 140 186 IPR001841 -
Mepo3g04223 980 Pfam JmjC domain, hydroxylase 827 925 IPR003347 -
Mepo3g04223 980 SUPERFAMILY Clavaminate synthase-like 462 962 - -
Mepo3g04223 980 ProSiteProfiles JmjC domain profile. 584 942 IPR003347 -
Mepo3g04223 980 Gene3D Cupin 452 951 - -
Mepo3g04223 980 FunFam Transcription factor jumonji (JmjC) domain-containing protein 754 951 - -
Mepo3g04223 980 MobiDBLite consensus disorder prediction 794 814 - -
Mepo3g04223 980 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 41 979 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04223 Mepo-Chr3 51229619 51243036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo3g04223 JmjC 5.2e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04223 K15601 - cave:132187182 1052.35