Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04208 ATGGAACAAGAAAAGAGCCATAGAATGTTCAATCTATTCGTGAAGCACTTGAACGGTAAAACCTTAACCCTATTATTCCCTTCTCCGATCCTTTCCGCTACTTCAATCAAAGATCGTCTTTTCCATCTCACCGGAATCCCAATCCAACACCAACGCCTCGTCACCGGTTGCCGCCACCTCAACGACGATAACTCGGCGATATGTTGTTCGCCGGAAGGTGGAAACATGTTCCCCTCCGTTCGTCTTCTTCTCCGTCTGAAAGGCGGGAAAGGAGGATTCGGATCGTTGCTTCGTGGTGCGGCGACGAAAGCGGGGCAGAAGAAGACGAATAATTTCGATGCTTGTAGGGATATGAGTGGGAGAAGATTAAGGCATGTTAATGCGGAGAAGAGGTTGGAGGAGTGGAGAGAAGGGGAAGGGGATAGGAAGCTTGAGAAAGTGGCGGAGGAGTTTTTGAAGAAACAGATGAAGAAGAATAATAAGGGGAAGGGGAAGAATGGTGATGTTGAGGCTCAGAAGTATGTTGCTAAGTATAGGGAACAGTCTGAACGTTGTGTTGCAGAGGTTGCCGAGTCTGTTCTGGATTCGATACGATATTCTAAGCGTAAATCTTCGCCTATATCGGAAGGTTCGCTTGCTCGTGATCAGAAGAAGTTGAAGATATGGATGGGGAAGAGGGCATTGAATGAAAGTGATGATGATTCTGATGAAGATGTTATTGATGATGAGGGAGAAACTGAGAAATCTGTTTTGTTAAATAGTCAGAATGAGTCTGGGTTAAATAAGGCTGAAGGCAGTTTTGATTCTGTGACTGGTTTCAAGCGGGATGGAGACTCTTCTGGGGTTGGTTCGTGTGAGAGTGGATCTGAAGAAGAAAAGGAAACTGTTGGAGAAGGCAAAGTGGAAATTGTTGAAAGATCCCAGAGTACTGAAAGTATTGAGGCAAAACTGAGTATTGCTGCTGAACCCATGGTAAATGATGAAATGATGGAGGCTAACGCTGTGCCTTGTTCAGAGACCTTGGATTCTTTAATTAGTGTTCAAGATGATGATTATCATGATAATAAGGTTGATGGCACTGGTGCTCAAGCCTCAAATGTTGTGAGCTCTGAAGTTGTGTCCAATGACATGGAAATTGATGGTTCTCTTGAGCATAAAACAGTGGTCATTGAAGAAAGCTTGCCAAGCACTAGTGTTCCAGCAAAGGAGGAGCCTCTTAATTTTGATGCTTTTAATTCAGCTGCAGAACTTGAGGTTCTTGGCTTGGAGAATTTGAAGACTGAACTCCAGTCACGTGGGTTAAAATGTGGAGGTACTTTGCAGGAACGTGCTGCAAGGCTTTTTCTTTTAAAATCAACTCCCTTGGATAAACTTCCAAAGAAACTGCTAGCAAAGAAATGA 1401 0.4397 MEQEKSHRMFNLFVKHLNGKTLTLLFPSPILSATSIKDRLFHLTGIPIQHQRLVTGCRHLNDDNSAICCSPEGGNMFPSVRLLLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWREGEGDRKLEKVAEEFLKKQMKKNNKGKGKNGDVEAQKYVAKYREQSERCVAEVAESVLDSIRYSKRKSSPISEGSLARDQKKLKIWMGKRALNESDDDSDEDVIDDEGETEKSVLLNSQNESGLNKAEGSFDSVTGFKRDGDSSGVGSCESGSEEEKETVGEGKVEIVERSQSTESIEAKLSIAAEPMVNDEMMEANAVPCSETLDSLISVQDDDYHDNKVDGTGAQASNVVSSEVVSNDMEIDGSLEHKTVVIEESLPSTSVPAKEEPLNFDAFNSAAELEVLGLENLKTELQSRGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04208 466 SUPERFAMILY Ubiquitin-like 6 70 IPR029071 -
Mepo3g04208 466 MobiDBLite consensus disorder prediction 251 299 - -
Mepo3g04208 466 PANTHER SPLICING FACTOR SF3A-RELATED 11 465 - -
Mepo3g04208 466 ProSiteProfiles Ubiquitin domain profile. 10 89 IPR000626 GO:0005515
Mepo3g04208 466 Gene3D - 1 109 - -
Mepo3g04208 466 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 158 IPR024974 -
Mepo3g04208 466 Pfam Replication stress response SDE2 C-terminal 398 465 IPR025086 -
Mepo3g04208 466 Coils Coil 412 432 - -
Mepo3g04208 466 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04208 Mepo-Chr3 51125513 51128347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04208 390 465 C2H2 Transcription Factor Family AT5G06160 44.737 2.43e-11 63.9