Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04199 ATGGAAGAGACTACCAAGAGAAAACGTGGTAGTATAATGAATGAATTAATCCAAGGAAAGGAGCTAGCAAAGCAGCTAAGTAACCATATAATTTTATCATCCAATGAAACCAATGAATTCTTGATTGACAAAATAATTTCAGCCTACCAGAAAGCACTTACTATGTTGAATGTGGGAGGAGGAGAGACTAAGACCATTGATGGTAAAATGAAGGATTCTCATTCTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTCATCATAGACCAGGAGTTTAACCATAATGCTCTCTTCAAGAAAAGAAAGAGCATGCCTAAATGGAAGGAGCAAGTGAAGATTTACACAAACAAAGGATTATTTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAGAAGGAAATTCTTGGAGCTAAGTTTTCAAGAGGGTATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTTACTTACAGAGGAAGACACACATGCACTCATTCTCAAGCTAAGCCTTTAAAAAGGGAATTTCCCTCAAAGTTAAAGATAAAGGGTTTGGAGAAAAATAAACTTCACAATGATAAAAAGAATCAACTACAAACTCAAGAAGCTAGTTTCACTTCCAAAACTGAACTTGATGTTAAAAGAAAGGACTTGGAAGAAACCAAAGAGGATATTTTCCCTTGGTTTTGTTTTCCTTCTCCATCAATTGGATCAGAAAATGAGATAATGATGGAATCAAACTTTTTTGGTTTGTCAGAATACCAATTAGGCTACAATGGATTATGCCAAAATGGACCAACTTCAGAATCTGATATCACTGATACTGTTTCAGCTCCAACTTCAGTCACCAATTCACCAATCCTTGATTTGGATATCTTGCTACAAAGAGGGGATTTTGACACTGATTTCCCTTTCAATACCCCTGAATATTTCTCTTCATAA 1002 0.3623 MEETTKRKRGSIMNELIQGKELAKQLSNHIILSSNETNEFLIDKIISAYQKALTMLNVGGGETKTIDGKMKDSHSSFTNESPKSEVIIDQEFNHNALFKKRKSMPKWKEQVKIYTNKGLFEGSLDDEYSWRKYGQKEILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHSQAKPLKREFPSKLKIKGLEKNKLHNDKKNQLQTQEASFTSKTELDVKRKDLEETKEDIFPWFCFPSPSIGSENEIMMESNFFGLSEYQLGYNGLCQNGPTSESDITDTVSAPTSVTNSPILDLDILLQRGDFDTDFPFNTPEYFSS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04199 333 FunFam WRKY transcription factor 53 109 187 - -
Mepo3g04199 333 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04199 333 SUPERFAMILY WRKY DNA-binding domain 123 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04199 333 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04199 333 Gene3D WRKY domain 112 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g04199 333 ProSiteProfiles WRKY domain profile. 124 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g04199 333 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 252 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04199 Mepo-Chr3 51032764 51035003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04199 3 324 WRKY Transcription Factor Family AT4G11070 37.117 1.14e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g04199 WRKY 6.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04199 - - mtr:11429817 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04199 3 51032764 51035003 Mepo1g03891 1 45214157 45217216 PCT