Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04182 ATGAATGATGAGTTCGGAAAGAAGAAAACCAAAAGAAGCAATGACGATGTGCCTAATCCTGATGGTGGAAATGGAATAGATTCAGCTGTGACAAAAAATTCTGATCAAATTGAAAAGGCAACAAGAAAAAGGAAGGATAAGAATGAAGATGATGTTGAGGAAGAGAGTGAATATGATCATGAAAATGATGGTCCAACAGCGCCGAAGAAGCCTCGATTTCTTTGGTCCAAAGACTTACACCACAAGTTTCTTGTCGCAGTTAATCAATTTGGCGTTGACAAGGCTAAGCCAAAAAAGATTCTTAATTTGATGAATGCTGAAAATCTTACAAAGGAACATGTGGCCAGCCATCTCCAGAAATATAGAAAAAAGCTGAAAAGTATTAGTTTTGGGGAAAACCAAAAAGCTAATATGGTGGCAAATTTAGTTAGTGGTTCTCTTACTCCTGGTAATGTCAATATCCATGGACTGGCTAACTCCACAAATGACCAGCTTACATTTCAACCGGCCATAGCTTGCGCCAAACCGAACCATGTTCAAAGAATGCCAATTTCTTATGCAGCATCTCAGCATATACAGTTTTCTTTCTCTTTGCATGAAAAAATGTGCAATGACATTTGGTCAAGCATGCAATTACCTGAAACAAATTCTTACATTCGACAAGGTGATGTTTTTAACAGTACTAGCAATGTGACATTTCAAGGATGGAATAATAACCATAATAATCATGATCGAAATTACAATTCTTCTCATCTGATTGGTAGTTCAATAGGCTCTTCTATGATTCCTGTTGTGAATCTTGAACCAGAAGGAAACTTGGACCACAAGGATGATCATATTGTGGAGTTAACAGAAGGGCTGCCATCGAAACAGGAACAATTATATGCTAATAACTCCGGTGGGAAATCAAAGTCACAGCAAGATAATTTCTTTTCCAAGATGAAGAAGTACTTAAATTTTCTATGA 966 0.3706 MNDEFGKKKTKRSNDDVPNPDGGNGIDSAVTKNSDQIEKATRKRKDKNEDDVEEESEYDHENDGPTAPKKPRFLWSKDLHHKFLVAVNQFGVDKAKPKKILNLMNAENLTKEHVASHLQKYRKKLKSISFGENQKANMVANLVSGSLTPGNVNIHGLANSTNDQLTFQPAIACAKPNHVQRMPISYAASQHIQFSFSLHEKMCNDIWSSMQLPETNSYIRQGDVFNSTSNVTFQGWNNNHNNHDRNYNSSHLIGSSIGSSMIPVVNLEPEGNLDHKDDHIVELTEGLPSKQEQLYANNSGGKSKSQQDNFFSKMKKYLNFL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04182 321 Gene3D - 66 128 - -
Mepo3g04182 321 FunFam Two-component response regulator 66 129 - -
Mepo3g04182 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 126 IPR017930 -
Mepo3g04182 321 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 11 309 IPR044841 GO:0003700|GO:0006355
Mepo3g04182 321 SUPERFAMILY Homeodomain-like 67 127 IPR009057 -
Mepo3g04182 321 MobiDBLite consensus disorder prediction 1 16 - -
Mepo3g04182 321 MobiDBLite consensus disorder prediction 36 51 - -
Mepo3g04182 321 NCBIfam myb-like DNA-binding domain, SHAQKYF class 70 124 IPR006447 GO:0003677
Mepo3g04182 321 Pfam Myb-like DNA-binding domain 75 122 IPR001005 -
Mepo3g04182 321 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04182 Mepo-Chr3 50912872 50915370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04182 30 140 Response Regulator Gene Family AT4G31920 54.054 9.19e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g04182 Myb_DNA-binding 1.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04182 - K14491 mtr:25481958 274.248