Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04166 ATGAATTGCTTTCCTTGTTTTACCTCTCAAAAGAGTAAGAAAAGCAATAGCAGGAGGGAAAATGGGGTTGCACCACCTCAAGAAAATAATAACCTTATAACCAGAACACCAGATATCAAGAAACCAAAGCCAGCTGATGATCCAAACCAAGTTGACACATCAAATATTCAAGCACAAAATTTTACATTTCGTGAGTTAGCAATTGCAACAAAGAATTTTCGCCAAGAATGTTTGATGGGTGAAGGTGGTTTTGGTAGAGTTTACAAAGGAACAATTCCTGCCACAGGACAGGTGGTAGCAGTGAAGCAACTTGATCGAAATGGGATTCAAGGAAGTAAAGAATTTCTGGTTGAGGTTTTGATGTTGAGTCTCTTAAACCATGAAAATCTTGTCAAACTCACTGGTTATTGTGCTGATGGCGATCAACGTCTTTTGGTCTATGAATTCATGTCAGGGGGCTCTCTAGAAAGTTGTCTTCTTGAGCGAAGAAATGATCAAGATCCATTAGATTGGTTTAGTAGAATGAAAATAGCATCTAGTACTGCAAAAGGATTGTGGTACTTGCACGACAAGGCAAATCCTTCAATTATATACAGGGACTTGAAATCGTCGAACATTTTGCTTGATAAGGATCTTAATGCAAAACTATCTGATTACGGACTTGCCAAACTTGCTGGTAAAGATAAGGCTAACATTGTGCCTACAAGAGTCATGGGTACTTATGGTTATAGTGCCCCTGAGTATGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTCATTACTGGAAGACGAGCCGTAGACACCACAAGATCGCACGACGAGCAAAATCTAGTTTCATGGGCACAACCAATATTTAGAGATCCTAAAAGATATGGAGATATGGCAGATCCAAATCTGAATAAAAATTATCCAGAAAAGGATCTTAATCAAGTTGTTGCAATTGCAGCCATGTGCTTACAAGAGGAATCAGCAGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTTTGAGTTTTCTTTCCACTTCTCCTCCTCCAGAATCTGTTCCTGCACCTCTTCCACCTCCCAATTCTACCTCCCAAAAGAGTGTTGCCTCTGCCGATGAAAGTGAGAGCGAAAATGATAATGACAGCCATAGTTCCGATGAAGAGCGTTCTGTTCACGAGGATAATAAGTCTATTACAGCAGCTAGTGCAAAACACCAAGAACATGATGATGTCTCTGATACTGAACGTGATTATTATGATAATGAAAACCAACATGATTATAGTTCACAAGATGCTGAAGAAACAAAGGAGTTCTACTCCAAGTCAAGCCGCAAAAGCAGCACCAAATCAAGGAAGGGGACCGTTTCTTCTGGCCGAAGGAACAACTCCAGTTCAGATTCAGAAAATGACCACAAAAGCAGTAGAAGAAAGCATGATGTGGATGGAAGTTTAACTCAGAAAAGCAGCAAAAAATCTGCTGCAAGAGATTTAAGCCAGAAGAGCAGTAAGAAATCTACGGCAACAAAGGATTTAAGCCAAAAGAGCAGTAAAAAATCTTCTGCAAGAGTTGAAAGTCAATCATCTCATAGCAGCAGCGACGAGGAGTCACATGATGGAGGTGTTCTTCTCAAGCGCGGTGACAGTAGGCCATCACATGATGGAAATGGATATTCCTTTGGCCTAGTGAGCAGTGATAGCGACGAAGGATCACATTTTGATCGCATGAGCACAGGGGGGTCTGAGGAGGGAAGCTTTCACCATGTCCAACATTCCAGCAGCAAAAAATCAGATGAGGGAAGTGTTCATTTATGA 1830 0.4109 MNCFPCFTSQKSKKSNSRRENGVAPPQENNNLITRTPDIKKPKPADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGIQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMSGGSLESCLLERRNDQDPLDWFSRMKIASSTAKGLWYLHDKANPSIIYRDLKSSNILLDKDLNAKLSDYGLAKLAGKDKANIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRSHDEQNLVSWAQPIFRDPKRYGDMADPNLNKNYPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTSPPPESVPAPLPPPNSTSQKSVASADESESENDNDSHSSDEERSVHEDNKSITAASAKHQEHDDVSDTERDYYDNENQHDYSSQDAEETKEFYSKSSRKSSTKSRKGTVSSGRRNNSSSDSENDHKSSRRKHDVDGSLTQKSSKKSAARDLSQKSSKKSTATKDLSQKSSKKSSARVESQSSHSSSDEESHDGGVLLKRGDSRPSHDGNGYSFGLVSSDSDEGSHFDRMSTGGSEEGSFHHVQHSSSKKSDEGSVHL 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04166 609 MobiDBLite consensus disorder prediction 534 557 - -
Mepo3g04166 609 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04166 609 Gene3D Transferase(Phosphotransferase) domain 1 150 354 - -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 505 533 - -
Mepo3g04166 609 PANTHER OS07G0668900 PROTEIN 3 355 - -
Mepo3g04166 609 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04166 609 Gene3D Phosphorylase Kinase; domain 1 37 149 - -
Mepo3g04166 609 SUPERFAMILY Protein kinase-like (PK-like) 59 382 IPR011009 -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 470 491 - -
Mepo3g04166 609 CDD STKc_IRAK 79 347 - -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 1 54 - -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 352 609 - -
Mepo3g04166 609 FunFam Serine/threonine-protein kinase PBS1 150 360 - -
Mepo3g04166 609 Pfam Protein kinase domain 75 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04166 609 MobiDBLite consensus disorder prediction 378 450 - -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 455 469 - -
Mepo3g04166 609 FunFam probable serine/threonine-protein kinase RLCKVII 45 149 - -
Mepo3g04166 609 MobiDBLite consensus disorder prediction 19 36 - -
Mepo3g04166 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mepo3g04166 609 MobiDBLite consensus disorder prediction 593 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04166 Mepo-Chr3 50781530 50785161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04166 1 381 Glycoside Hydrolase AT3G07070 61.893 5.45e-168 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo3g04166 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04166 - - gmx:100807682 712.99