Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04149 ATGGAGTCCAATGACAACCAATTAAGCTCTTTCTTCCACCACCACAACCACCAACAACAACAACAGCAGCAGCACCACCAACAAAACTCCACCACCGTAACCACAACCACCACTACCACCCCATCTCCGACGAACGGTCTTTTACCACCAAACACAGATGGGTCCCACATACTTTACCCTCATTCAGTGGCTTCTTCTGCTGTTTCTTCTCAGCTTGAACCAGCTAAGAGGAAGAGAGGTAGACCTAGAAAATATGGTACTCCTGAACAAGCCCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCCCCTACTCCACCCACTCTTGACAACAACAAGAATACTCATTCTTTCTCTCCTTCTCCTTCTTTCACCTCTAAGAAATCTCATTCTCTCTCTCTAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGGCAGAAAATTATGCAATTTATGCAACAAAATAGGGGTGAGATATGCATTATGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCAGCATCTTCAGGAGGCAACATTATGTATGAGGGTCGGTTTGATATTATTTCGCTTACCGGTTCCTACGTCCGTAATGAAACCGGAGGCCGAAGTGGTGGTCTTAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATCGACAACAAGAAGGATACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAATTTAGGTTTCCGCCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAGCTTGGTTTGCACGTGACACCTCCCAGGACTACAGAATGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGAAGAACAGGTCATGGGTCTCACCAGTCTCCTGAGAATGGAGGCTATGACCAAATTCCTGATTGA 1098 0.4663 MESNDNQLSSFFHHHNHQQQQQQQHHQQNSTTVTTTTTTTPSPTNGLLPPNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTPPTLDNNKNTHSFSPSPSFTSKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQNRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTSAGGKGDPSAGKLPSPVGEPASNLGFRQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRTTEWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04149 365 MobiDBLite consensus disorder prediction 1 133 - -
Mepo3g04149 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 292 IPR039605 GO:0003680
Mepo3g04149 365 Gene3D - 142 266 - -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 93 133 - -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 324 365 - -
Mepo3g04149 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 58 72 - -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 1 51 - -
Mepo3g04149 365 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 286 301 - -
Mepo3g04149 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 253 - -
Mepo3g04149 365 MobiDBLite consensus disorder prediction 260 306 - -
Mepo3g04149 365 CDD DUF296 144 253 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04149 Mepo-Chr3 50584345 50588624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04149 31 365 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.226 4.45e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04149 - - gmx:100809675 476.092