Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04148 ATGGAAAAAGGGTTTTCTTCTTCTTTGTTGTTATTGCTATTGTTGATGATTAGTTCTTTTGTGATATCTGTTTATGGGATTGATGATGAATATGTACATTGCAACTGTGATGATGATGGGATTTGGAGTGTACAAAGTATTTTGGTTTGTCAAAAAGTCAGTGACTTTTTCATTGCTATTGCATATTTTTCAATACCCCTTGAGCTTCTTTACTTTGTTAGCTACTCCAATGTTCCATTTAAATTGGTATTTCTTCAGTTTGTTGCCTTTATAGTTCTATGTGGTTTGACCCATTTGCTCAATGCCTATACTTACTATGGCCCTCATTCCTTTCAATTGTTTCTATCTCTCACTGTTGCTAAATTCCTCACTGCCCTTGTTTCATGTGCCACTGCAATTACTTTTCCCACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTTTTCTTGAAGCAGAATGTGTTGGAATTGGGGCAAGAAGTTGGGATTATGAAGAAACAGAAGGAGGCTAGTTGGCATGTTAGGATGTTGACTCGCGAGATTAGGAAGTCTTTGGATAAGCATACAATATTATATACCACACTTGTTGAGCTTTCCAAGGCCATGGAGTTGCATAATTGTGCGGTTTGGATGCCTGATGAGGATAGAAGGGTGATGCATTTGACTCATGAGTTGAAGCCGAATCCGGCGAAGAGTTTTCATAGTTCTATTTCTGTAAATGATTTGGATGTGTTAGAGATAAGAAAGAGCAAAGGGGTGTCGATTTTGAGGCCTGATTCTGCACTCGGAGCTGCCAGTAGTGGTGAATCTGGGGACTCGGGTGCTGTAGCAGCCATTCGTATGCCAATACTTCATGTGTCGAATTTCAAAGGAGGGACACCGGAGTTTGTTGAGACATCTTATGCTATACTAGTTTTGGTTCTTCCGAAATCGAACTCAAGGGCTTGGACCCACCATGAGATGGAGATAGTGGAGGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGTTAATGAGACAGGAACTTAAAGAGCAAAACCGGGCGTTGCAACAGGCACAAAAGCATGCAATGATGGCCCGCCAGGCAAGGAGCTCATTTGAGAAAGTGATGAGCCATGGAATGAGGAGACCGTTGCATTCAATCCTGGGCTTGCTTTCAATGTTTCAAGAGGATAATATAAGATCTGAGCAGAAGATTGTGGTTGATACAATATTGAAAGTTAGCAATTCGCTCTCGCGTTTGATAAATGATGTAATGGAAATTTCAGCCAACGACAAAGGAAGTTTCCAGTTAGAGTTGAAACATTTCCATCTACATTCCATGATGAGGGAAGCTTCATGCATTGCCAAGTGTTTGTGTGTGTATAAAGGCTTTGGTCTTGAAATTGACGTGCAAAGATCCTTGCCTGATATGGTAATAGGTGATGAGGCAAGGTCTTTTCAGTTAATTTTGCATATGATTGGCTATTTATTGAACTTATATGATAGAGGGACTCTCATTTTTCGAGTTTCTTTTGAAAGTGATACCGCAGATAAGGATGATAGAAGTTCTGGAATATTGAGATCAAGCATGCAAAATGATAATGTGCATATAAAATTTAATTTCCAGATAACTGGTACTAGTTCCTATTCAGATGGACCAATTTTAAATAGTAGTTGTGCTAGTAGGATGCACCACAGCAATGAACCTAAGGAGGGCCTAAGCTTCAGCATTTGCAAAACGCTGGTGCAGATGATGGAAGGTAATATCTGGATATCACCAAACTCTCTGGGTTTGGCTCAAGGGATGACACTTCTTCTCAAGTTTCAATCAGGATCATCGCATGGAAGATTCGTTCTTGCTAACAAAGATTTTTCAAACCAACAGTTTAGAGGTCTTAACGTTATTTTAGCCGATGATGATAATGTAAACAGGACTGTAACTATGAAGCTGCTTGAGAAGCTGGGTTGTCAAGTAATCGCCGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCGTCCAGTATACCATTCAAAATCATCCTATTGGATCTTCAAATGCCTGAAATGGATGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCCTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACGCATAAAGGAGAGATGCCTACAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTCCTTCACGAGATAGCTAATGAAATTAGAACAGTCCTGCTACGTGCGGGTGAAAAGTTCTAA 2292 0.404 MEKGFSSSLLLLLLLMISSFVISVYGIDDEYVHCNCDDDGIWSVQSILVCQKVSDFFIAIAYFSIPLELLYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFQLFLSLTVAKFLTALVSCATAITFPTLIPLLLKIKVREFFLKQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKAMELHNCAVWMPDEDRRVMHLTHELKPNPAKSFHSSISVNDLDVLEIRKSKGVSILRPDSALGAASSGESGDSGAVAAIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRAWTHHEMEIVEVVADQVAVALSHASVLEESQLMRQELKEQNRALQQAQKHAMMARQARSSFEKVMSHGMRRPLHSILGLLSMFQEDNIRSEQKIVVDTILKVSNSLSRLINDVMEISANDKGSFQLELKHFHLHSMMREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDEARSFQLILHMIGYLLNLYDRGTLIFRVSFESDTADKDDRSSGILRSSMQNDNVHIKFNFQITGTSSYSDGPILNSSCASRMHHSNEPKEGLSFSICKTLVQMMEGNIWISPNSLGLAQGMTLLLKFQSGSSHGRFVLANKDFSNQQFRGLNVILADDDNVNRTVTMKLLEKLGCQVIAVSSGFDCLAAITASSIPFKIILLDLQMPEMDGFEVARKIRKFQSRNWPLIIALTASAEERIKERCLQVGMNGLIRKPILLHEIANEIRTVLLRAGEKF 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04148 763 ProSiteProfiles Response regulatory domain profile. 638 756 IPR001789 GO:0000160
Mepo3g04148 763 Coils Coil 343 373 - -
Mepo3g04148 763 FunFam Ethylene receptor 4 340 434 - -
Mepo3g04148 763 Gene3D - 623 756 - -
Mepo3g04148 763 CDD HATPase_ETR2_ERS2-EIN4-like 479 611 - -
Mepo3g04148 763 PIRSF Ethylen_sen_hybr_HK 7 762 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mepo3g04148 763 CDD HisKA 372 433 IPR003661 GO:0000155|GO:0007165
Mepo3g04148 763 Gene3D - 338 436 - -
Mepo3g04148 763 SUPERFAMILY CheY-like 633 756 IPR011006 -
Mepo3g04148 763 Pfam Response regulator receiver domain 639 752 IPR001789 GO:0000160
Mepo3g04148 763 Pfam GAF domain 190 337 IPR003018 GO:0005515
Mepo3g04148 763 CDD REC_ETR-like 637 752 - -
Mepo3g04148 763 ProSiteProfiles Histidine kinase domain profile. 380 617 IPR005467 -
Mepo3g04148 763 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 358 438 IPR036097 GO:0000155|GO:0007165
Mepo3g04148 763 Gene3D - 172 337 IPR029016 -
Mepo3g04148 763 FunFam Ethylene receptor 635 759 - -
Mepo3g04148 763 SMART gaf_1 188 347 IPR003018 GO:0005515
Mepo3g04148 763 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155|GO:0007165
Mepo3g04148 763 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 31 759 - -
Mepo3g04148 763 SMART REC_2 637 752 IPR001789 GO:0000160
Mepo3g04148 763 SUPERFAMILY GAF domain-like 191 340 - -
Mepo3g04148 763 Gene3D - 437 616 IPR036890 -
Mepo3g04148 763 SMART HisKA_10 373 438 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04148 Mepo-Chr3 50578355 50582012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04148 28 761 Miscellaneous Gene Families AT3G04580 61.467 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g04148 GAF 7e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04148 K14509 - gmx:100805023 1206.82