Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04144 ATGGGAGAAAAAATAACGTTTGAACAAACCCTTGAGAAGAAACAGCTCGAAGTACAGAAAGAAATAGGCAAGGGATCCTACGGCACAATTTTCCAATGCTATCACACCATTACAAACCAAACCTACGCCGTCAAAGTAATTAACAAACATTCACTAGCCAATCCAACAGACATTAAATGTTTCGTCAAAGAATCCAAAATCATGAAACACCTCTCTCCACACCCTAACATTCTTAAAATATTTGATTCCTTCAAAGACATCGATTTCTCCTTCATCGTTCTTGAACTCTGTCAGCCCAATTATGACCTCTTGGAACGCATTCTCAAAGGTCCTGTATCGGAACAACAAGCTGCTTCGTACATGAAGAACCTTCTAGAAGCAATAGTGCACTGCCATAAGCATGGCATAGCACACAAAGACATAAAACCAGATAATATTTTGTTTGATTTTAATGGAAACATTAAACTTGCTGATTTTGGTAGTGCAGAGTGGTTATTTGAGGGTGGAAAGAAAAAGAATGGATTTGTTGGAACAATTCATTATATGGCACCTGAAGTGATTTTGAGAAAAGAGCATGATAGTACCAAAGTTGATGTTTGGAGTTGTGGTGTTACTCTTTATGTAATATTGTGTGCAATAGAGCCCTTTCATGGAGAAACTCCTGATGAGACTTTTAAGGCTATCTTGAAGACAGATTTAAGGTTTCCAATGACAACATTTATATCTATGTCGACACCTGCTACTGATCTGATTAGGAAGATGCTTTGTAGGGATCCCTCTAAACGAATATCAGCTGAGGAAGCTTTGATGCATCCGTGGATCTTGAAAGGTGGAGTGATTGGTGACAATATTCAGCCACTAAAGCGGTGCAAGGAAATTTCTTTAGTTCCCATCTCCTCCTTTTAG 906 0.3852 MGEKITFEQTLEKKQLEVQKEIGKGSYGTIFQCYHTITNQTYAVKVINKHSLANPTDIKCFVKESKIMKHLSPHPNILKIFDSFKDIDFSFIVLELCQPNYDLLERILKGPVSEQQAASYMKNLLEAIVHCHKHGIAHKDIKPDNILFDFNGNIKLADFGSAEWLFEGGKKKNGFVGTIHYMAPEVILRKEHDSTKVDVWSCGVTLYVILCAIEPFHGETPDETFKAILKTDLRFPMTTFISMSTPATDLIRKMLCRDPSKRISAEEALMHPWILKGGVIGDNIQPLKRCKEISLVPISSF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04144 301 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mepo3g04144 301 FunFam Calcium-dependent protein kinase 3 3 99 - -
Mepo3g04144 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Mepo3g04144 301 FunFam Maternal embryonic leucine zipper kinase 8 288 - -
Mepo3g04144 301 SUPERFAMILY Protein kinase-like (PK-like) 11 277 IPR011009 -
Mepo3g04144 301 CDD STKc_CAMK 17 273 - -
Mepo3g04144 301 Gene3D Transferase(Phosphotransferase) domain 1 8 294 - -
Mepo3g04144 301 PIRSF ILK 1 270 - -
Mepo3g04144 301 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04144 301 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04144 301 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 281 - -
Mepo3g04144 301 Pfam Protein kinase domain 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04144 Mepo-Chr3 50547883 50548996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04144 17 274 EF-hand Containing Proteins AT5G19450 40.458 1.45e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo3g04144 Pkinase 3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04144 - K08794 mtr:11423185 544.658