Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04139 ATGGATAATCTGGTGGATAATCCTATGTTTGGAGCTTTGTTGATCATCTTGACTCCACTTTTCACATTGTGTTGCATCCTTCTCGTTCACCTATGTGTCCACACTTACCGCCGGTTCCTTTCTAAGTCCCCCTCCGTGGAATCCCCTCAATACAACATTGAGTCAACAACGATGGAGGAGGAGGGGGAGGAGGTTGCACATGGCTTAGACGATTCTGTTATAAACGCTATTCCGTTCTTCATTTACACCACTAACAGGTCTGAACAAGAAGAAGAATCTTGTGGTGAGTGTGCAGTTTGCTTGGAGGAATTCCAAGATAATGATCACATTCGTACCCTCCCTCTTTGCTCTCACACTTTTCATCTCAATTGCATTGACGTTTGGCTTCGTTCAAACGCTAGCTGTCCTATATGTCGCTCTTGTCTTGTTGAGGAGGACTATCTGCCCAAACGCTCTAATGCATCCGAGTGGACCTTGTCATCGGAGAGAATGGTCGTCATCCACATCCCTGCCACCATATCCCCATCGTAG 531 0.4633 MDNLVDNPMFGALLIILTPLFTLCCILLVHLCVHTYRRFLSKSPSVESPQYNIESTTMEEEGEEVAHGLDDSVINAIPFFIYTTNRSEQEEESCGECAVCLEEFQDNDHIRTLPLCSHTFHLNCIDVWLRSNASCPICRSCLVEEDYLPKRSNASEWTLSSERMVVIHIPATISPS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04139 176 SMART ring_2 97 138 IPR001841 -
Mepo3g04139 176 CDD RING-H2_EL5-like 96 139 - -
Mepo3g04139 176 Pfam Ring finger domain 96 139 IPR001841 -
Mepo3g04139 176 PANTHER RING-H2 FINGER PROTEIN ATL16 17 144 IPR044600 GO:0016567|GO:0016740
Mepo3g04139 176 SUPERFAMILY RING/U-box 83 145 - -
Mepo3g04139 176 FunFam E3 ubiquitin-protein ligase ATL6 57 145 - -
Mepo3g04139 176 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Mepo3g04139 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 143 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04139 Mepo-Chr3 50520578 50521108 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04139 67 143 C3H Transcription Factor Family AT3G18930 47.619 9.58e-24 94.4