Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04129 ATGGCAAAAAACCCTTGTTGTGAGAGGATGGGAATGAGGAAAGGACCATGGAGTGCTGAAGAAGATCAAATATTGATTTCTCATATTCAAACATATGGTCATGGAAATTGGCGTGCTCTTCCTAAACAAGCTGGTTTGTTAAGGTGCGGTAAGAGTTGTAGACTTCGTTGGATAAATTACTTGAGACCAGATATCAAACGAGGAAAATTTAGTAAAGAAGAAGAAGATTCAATCCTAAAGCTACATGAAGTTCTCGGAAATAAATGGTCTGCAATTGCAGCAAGATTACCAGGACGAACGGATAATGAAGTGAAGAACTTTTGGCATACACATTTGAAGAAAAAGGTGCAAAAAAGTGAAGTGTACAATGTCAATACCTCTTATTCCTATACTTTGGATGAGGCACAAGCAAGTGATGGTTATAGTGTCGGTGAAAAAATAGTTATTTCCAATTATGGTTTAGTCTCAAGCAAGGATCCAAACACTGTAGAGTCAGGATTTTACAATGCAATCTCTTGTGATACTTTAGGAGAAAATATGAGCAATCATGGTTCAAGTCAGATTAGTGAAGAAATGGAATTTTGGTACGATGTATTCATTAAATCAGGTCAACCATCATGA 621 0.3671 MAKNPCCERMGMRKGPWSAEEDQILISHIQTYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEDSILKLHEVLGNKWSAIAARLPGRTDNEVKNFWHTHLKKKVQKSEVYNVNTSYSYTLDEAQASDGYSVGEKIVISNYGLVSSKDPNTVESGFYNAISCDTLGENMSNHGSSQISEEMEFWYDVFIKSGQPS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04129 206 CDD SANT 69 112 IPR001005 -
Mepo3g04129 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g04129 206 CDD SANT 16 61 IPR001005 -
Mepo3g04129 206 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mepo3g04129 206 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 138 - -
Mepo3g04129 206 FunFam MYB-related transcription factor 13 66 - -
Mepo3g04129 206 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g04129 206 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo3g04129 206 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g04129 206 Gene3D - 14 66 - -
Mepo3g04129 206 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g04129 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo3g04129 206 Gene3D - 68 131 - -
Mepo3g04129 206 SMART sant 66 114 IPR001005 -
Mepo3g04129 206 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04129 Mepo-Chr3 50442722 50444013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04129 1 199 MYB Transcription Factor Family AT2G31180 47.436 1.63e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g04129 Myb_DNA-binding 7.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04129 K09422 - gmx:102663040 306.605