Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04122 ATGAGGATTATGATAAAGGGAGGTGTTTGGAAAAACACCGAGGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCGTATCTCGTCCCTACTCGTTCGCAAATCTGCAAAACAGTGTAAAGCCCGTTGGTATGAGTGGTTAGATCCTTCCATTAAGAAGACCGAGTGGACTCGAGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACCATTGCTCCCATTGTTGGACGTACTCCTTCGCAGTGTCTTGAACGGTATGAGAAACTCCTTGACACCGCTTGTGTTAAGGATGATAACTATGAGCCTGGTGATGACCCTAGGAAATTGCGTCCGGGGGAGATTGATCCGAATCCTGAATCGAAGCCTGCGCGACCTGATCCTGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCCGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAAAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCGAGGAGGCTCGCTTCTTTGCAGAAAAAGAGAGAACTGAAGGCTGCTGGGATTGATATAAGGCAGCGGAGGAGGAAAAGGAGAGGGATTGATTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCGGGTTATTTTGATGTTGCTGATGAGGATAGGGAGGTGGAGCAGCCTGCATTCCCTACTACTATTGAAGAACTTGAGGGGAAAAGAAGGATTGATGTTGAAGCACAGTTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCAGCTGCTATTCTGCATGCCAACAAGCTGAATGACCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCGCCTCAGATTTCCGATCAAGAATTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAATTCACCGAAGGCAGTAGTGCTACTCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCAAGCCAGGACTCCTTTAAGAACTCCTCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGCTGAGGGAGTCTCAGACACCACTGTTAGGAGGAGAAAACCCGGAGTTGCATCCTTCAGATTTCTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACGCCGGCAAGGGATGGTTTTTCTTTTGGCACGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAAGATATGGAGATGCGTGATGGTGCTAAGCTCGAGCTACGGAGACAAGCTGATATGAAAAAAAGTCTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAATTCAAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTTCAGCATCTCTGGAGCTTATTAGGAACTCCTTGATAAGAGCTGACGGAGACAAAAGTTCATTTGTTCCACCAACCCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCATGACAATGCTAAATATCCGCTTGAGGAGATGGCAAATAAGGAGAAGAAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTATCCCTGTCATAGAAGATTATCAGGAGGACGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGGGAGGCGATGGGGCATGAAAATGATTCCCTCGAGGAATTTGTTGAAGCACATACAACTTGCATTAATGATTTAATGTACTTTGATACCCGTAACGCCTATGGTTTATCAAGTGTTGCTGGAAATGCGGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAGAAGTAAGCTGGATGATGGGAAGGAGAAGATGATTCGACTTGAGAAGAAGGTTACATTACTCACACAAGGGTATGAGATGAGATCAAAAAAAGGTCTTTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGACGTGGCTGCAACAGAATTTGAGTGTTTTCAAGCTTTAAAAAAGCAGGAGCAGTCAGCAGCATCACATAGAATAAACAATCTTTGGTCTGAAGTTCAGAAGCAAAAGGAACTTGAGAAAACTTTACAGAAGAGGTATGGGGATCTTATGGCAGAGCTGGAAAGGACACGAAATGTAATGGAGCACTTCAGGGTACAAGCACAACAGAAGGAAGAAATTGAAGCCAAGAATCGTGCAATAGAAGAGATACAAGCACAACAAAAGGAAGAAATTGAAGCCAAGAATCATGCAATAGAAGAGGTACAAGCACAACAGCAAGAAGAAACTGAAGCTAAGAATCATGTACTTGAGAGTACTGTATCCACAGCTGATGAAATGAATGTGCAGGGTACAGAAAATAGTGAACCGGTGCCCCTCTCAGCTGACCAGCAAATAGCCACCATGCAAGATCAGGCTTCTTCTAGCTCCAAAATCGACATGGATGTGGATTCTAGTGAAGCACAAATGACAGACAGTACTGGTGTTACATTGCCAGATGCACCTGCTGCGGAGGATGAGCATTCAAAAGTTGCAGAAGACAAAAATGTTGAAGAAAATAGTGAGACCGCAGTAGATATGAGTGCTGCGGTGGAAATAAAAAGTGATGAGGGAAATGAGGAGGGTCAAGATGTTGGGAATCCAGATGAGATTATGGAAGCTTCAAACCAACCTGATAATAGCATAATTCAACTTGATGACATGCAAGTTGCTGATGGTAAAGGAGATGAGGCAAATTAG 3006 0.4491 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDREVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEEFTEGSSATRALLPNYPQTPNQARTPLRTPQRTPASKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPARDGFSFGTTPKGTPLRDELHINEDMEMRDGAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPIQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPSASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEMANKEKKKGSKRAANGPAIPVIEDYQEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFDTRNAYGLSSVAGNAEKLAALQNEFENVRSKLDDGKEKMIRLEKKVTLLTQGYEMRSKKGLWPQIEATFKQMDVAATEFECFQALKKQEQSAASHRINNLWSEVQKQKELEKTLQKRYGDLMAELERTRNVMEHFRVQAQQKEEIEAKNRAIEEIQAQQKEEIEAKNHAIEEVQAQQQEETEAKNHVLESTVSTADEMNVQGTENSEPVPLSADQQIATMQDQASSSSKIDMDVDSSEAQMTDSTGVTLPDAPAAEDEHSKVAEDKNVEENSETAVDMSAAVEIKSDEGNEEGQDVGNPDEIMEASNQPDNSIIQLDDMQVADGKGDEAN 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 110 149 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 925 943 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 324 360 - -
Mepo3g04122 1001 Coils Coil 809 854 - -
Mepo3g04122 1001 Coils Coil 167 187 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 324 355 - -
Mepo3g04122 1001 Gene3D - 59 114 - -
Mepo3g04122 1001 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 409 423 - -
Mepo3g04122 1001 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Mepo3g04122 1001 Pfam Myb-like DNA-binding domain 10 70 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 380 447 - -
Mepo3g04122 1001 SUPERFAMILY Homeodomain-like 33 107 IPR009057 -
Mepo3g04122 1001 SMART sant 6 55 IPR001005 -
Mepo3g04122 1001 SMART sant 58 105 IPR001005 -
Mepo3g04122 1001 CDD SANT_CDC5_II 55 106 IPR047240 -
Mepo3g04122 1001 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 803 IPR047242 GO:0000398|GO:0000974
Mepo3g04122 1001 FunFam CDC5 cell division cycle 5-like 60 120 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 887 1001 - -
Mepo3g04122 1001 Coils Coil 689 716 - -
Mepo3g04122 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Mepo3g04122 1001 Gene3D - 5 58 - -
Mepo3g04122 1001 CDD SANT 10 53 IPR001005 -
Mepo3g04122 1001 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Mepo3g04122 1001 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Mepo3g04122 1001 FunFam CDC5 cell division cycle 5-like 5 59 - -
Mepo3g04122 1001 MobiDBLite consensus disorder prediction 887 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04122 Mepo-Chr3 50381523 50389015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04122 1 815 MYB-Related Transcription Factor Family AT1G09770 75.428 0.0 1218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g04122 Myb_Cef 4.3e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04122 K12860 - gmx:100790369 1429.85