Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04114 ATGGAACAAGAAGAATATACAAAGGAACAGATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATTGTTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTTCGAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTTATTAAACCAAAATTGTCTCGAACAGATTTTACTATTGCTCATTATGCAGGCGAGGTGCAGTACCAGTCTGACCAATTTTTAGATAAAAACAAGGATTACGTGGTTCCTGAACATCAAGATTTATTGAGTTCTTCCAAATGTTCTTTCGTAGCGGGCCTTTTTCCTCCACCTCCAGAAGAGACATCAAAATCTTCAAAGTTTTCTTCGATTGGTTCTCGTTTTAAGCTGCAACTACAGCAACTAATGGAGACATTAAACTCAACTGAGCCTCATTACGTTAGATGTGTAAAACCAAACAACCTTCTCAAGCCTGCAGTTTTTGAGAATGTCAACATTATGCAACAACTTCGATGTGGTGGTGTTTTAGAGGCAATCAGGATAAGTTGTGCTGGGTACCCAACTCGCCGTGCTTTCTTTGAGTTTATAAACCGATTTTCCCTCCTTGCCCCAGAGGCCACGGAAGGAAACCTTGATGAGAAGGCTGGTTGCCATAAGATTCTAGAAAAGATGGGGCTTAAAGGATATCAGATTGGGAAAACAAAGGTATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCCCGGAGAGCTCAAGTACTAAGTGTAGCAGCAAAAACTATCCAACGGCGTGTACGAACCTATCAGGCTCGTAGACATTATCTTGCATTACGAAAGAAAACCATATACGTACAGTCTCTATGGAGAGGAAGACTTGCATGCAAACTTTATCAGAACCTGAGAAGGGAGGCTGCTGCTGTGAAAATTCAGAAGCACGTACGCAGATATGAATCGAGGAAATCCTACAATAAACTCCATGCATCAGTGCTTACTTTGCAAACAGCTTTGAGGGCAATCGCTGCCCGTAAGGAGTTCGGTTATAGGAAACGGACTAAAGCTTCCACCATTATTCAGGCTCGCTGGCGGTGCCACAACGCTTCCTCATATTATAAAAGGCTGAAGAAAGGTTCAATTGTGACACAATGCAGATGGAGGGGGCGTGTAGCCAGAAAAGAGCTTAGGAGCCTGAAAATGGCTTCAAGAGAAACTGGTGCACTTAAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACATGGCGCCTCCAACTAGAAAAAAGTTTAAGGACCAATCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAACTCCCTGCAGGATATGCAGAGCAAAGTTGATGAAACCACCTCCCTGCTTGCAAAGGAGCGAGAGAATGCAAAAAAGTCCATTGAAGAAGCACCTCCTGTTATTCAAGAGACCCAGGTTATTGTTGAAGACACACAGAAGGTTGAATCACTAACAGCAGAAGTTGAGAGTTTAAAGATGTCACTAGAGTCGGAGAAACAGAAATCTGATGATTTTGAAAAGAAATATAATGAAGCCCAAGCTTACAGTGAAGAAAGGTCTAAAAAATTAGAAGACACAGAAAAGAAGGCTCGTCAGCTCCAAGAATCACTGACCAGGCTAGAAGAGAAGATTAATAATTTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTTTCCATGGCACCTAATAAGTTCCTCTCGGGACGCTCTCGATCAATTATTCAGGTACTCCTTGGGATGAATCTTATATACATGGTAATAAAATTAATCTTAAAGTTTGATATGCATAGCCCATCAATGAACCACAGGGAATCCGCAGAGGTGGAGGATAAACCACAGAGGTCATTGAATGAGAAACAACAGGAGAATCAAGAGTTGCTCATTAGATGTATTGCACAACATCTAGGCTTTGCTGGGAATAGACCAATTGCTGCCTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGTACAAGCGTGTTTGATCGTATAATCCAAACTATAGGCCATGCAATTGAGACCCAGGAGAACAACGACATCTTGGCTTATTGGTTATCCAATGCTTCTACACTTCTCTTGTTGCTCCAGCGCACACTTAAAGCGAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGCCGTTCTTCCTCAGCAACCCTGTTTGGGAGGATGACACAAAGTTTCCGTGGAGCTCCAGCGGGAGTCAATCTTTCCCTAATCAATGGTAGCATGAATGGGGGAGGAGATACATTAAGACAGGTTGAGGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACGGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTAGTTAAGGGATCATCACGTTCAGTTGCAAACACTGAAGCGCAAAAAGCCTTGATTGCTCACTGGCAGGGAATAGTCAAGAGCCTCGGAAACTTCCTAAATACTTTGAAAGCAAATAATGTCCCCCCATTTTTGGTTCGGAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTCCAACTCTTCAATAGTCTTCTCTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTGAAAGCTGGTCTGGCTGAATTGGAGCATTGGTGTTATAAAGCAACCGATGAGTATGCAGGTCCAGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGTTGGACGAAATAAGTCATGACCTGTGTCCGGTCCTCAGTATCCAGCAGCTATATCGAATTAGTACCATGTACTGGGATGACAAGTATGGCACACATAGTGTGGCCCCTGATGTAATATCCAATATGCGAGTGCTGATGACTGAGGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCAAAGTCAAATGAACAGATAGATATCTCTGATATAGAGCCTCCGCCATTAATTCGCGAGAACTCTGGCTTTAGTTTCTTGTTGCCGCGCCCAGATTGA 3195 0.4213 MEQEEYTKEQIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVQYQSDQFLDKNKDYVVPEHQDLLSSSKCSFVAGLFPPPPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYVRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEATEGNLDEKAGCHKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSVAAKTIQRRVRTYQARRHYLALRKKTIYVQSLWRGRLACKLYQNLRREAAAVKIQKHVRRYESRKSYNKLHASVLTLQTALRAIAARKEFGYRKRTKASTIIQARWRCHNASSYYKRLKKGSIVTQCRWRGRVARKELRSLKMASRETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLQNSLQDMQSKVDETTSLLAKERENAKKSIEEAPPVIQETQVIVEDTQKVESLTAEVESLKMSLESEKQKSDDFEKKYNEAQAYSEERSKKLEDTEKKARQLQESLTRLEEKINNLESENQVLRQQAVSMAPNKFLSGRSRSIIQVLLGMNLIYMVIKLILKFDMHSPSMNHRESAEVEDKPQRSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQENNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPAGVNLSLINGSMNGGGDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANNVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGPAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVAPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSNEQIDISDIEPPPLIRENSGFSFLLPRPD 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04114 1064 SMART MYSc_2a 1 265 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04114 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 415 IPR027417 -
Mepo3g04114 1064 Gene3D - 1 155 - -
Mepo3g04114 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 317 IPR027417 -
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 315 344 IPR000048 GO:0005515
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 290 319 IPR000048 GO:0005515
Mepo3g04114 1064 PANTHER MYOSIN 1 995 - -
Mepo3g04114 1064 Coils Coil 448 482 - -
Mepo3g04114 1064 FunFam unconventional myosin-Va 269 317 - -
Mepo3g04114 1064 Gene3D - 365 414 - -
Mepo3g04114 1064 Gene3D - 317 364 - -
Mepo3g04114 1064 Gene3D - 267 316 - -
Mepo3g04114 1064 Pfam DIL domain 883 986 IPR002710 -
Mepo3g04114 1064 ProSiteProfiles Myosin motor domain profile. 1 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04114 1064 SMART DIL_2 882 989 IPR002710 -
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 363 390 IPR000048 GO:0005515
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 267 294 IPR000048 GO:0005515
Mepo3g04114 1064 Coils Coil 409 443 - -
Mepo3g04114 1064 FunFam unconventional myosin-Va 365 413 - -
Mepo3g04114 1064 CDD MyosinXI_CBD 645 1030 IPR037975 GO:0007015
Mepo3g04114 1064 MobiDBLite consensus disorder prediction 519 553 - -
Mepo3g04114 1064 Gene3D Kinesin motor domain 156 198 IPR036961 -
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 338 367 IPR000048 GO:0005515
Mepo3g04114 1064 Pfam IQ calmodulin-binding motif 390 407 IPR000048 GO:0005515
Mepo3g04114 1064 Pfam IQ calmodulin-binding motif 270 287 IPR000048 GO:0005515
Mepo3g04114 1064 Pfam IQ calmodulin-binding motif 364 384 IPR000048 GO:0005515
Mepo3g04114 1064 Pfam IQ calmodulin-binding motif 317 335 IPR000048 GO:0005515
Mepo3g04114 1064 Pfam Myosin head (motor domain) 2 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04114 1064 ProSiteProfiles IQ motif profile. 386 415 IPR000048 GO:0005515
Mepo3g04114 1064 Coils Coil 507 583 - -
Mepo3g04114 1064 Gene3D - 199 265 - -
Mepo3g04114 1064 SMART iq_5 337 359 IPR000048 GO:0005515
Mepo3g04114 1064 SMART iq_5 362 384 IPR000048 GO:0005515
Mepo3g04114 1064 SMART iq_5 289 311 IPR000048 GO:0005515
Mepo3g04114 1064 SMART iq_5 266 288 IPR000048 GO:0005515
Mepo3g04114 1064 SMART iq_5 385 407 IPR000048 GO:0005515
Mepo3g04114 1064 SMART iq_5 314 336 IPR000048 GO:0005515
Mepo3g04114 1064 ProSiteProfiles Dilute domain profile. 694 1007 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04114 Mepo-Chr3 50324989 50333813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04114 1 1064 Myosins gene family AT1G54560 81.297 0.0 1795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04114 K10357 - gmx:100816792 1833.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04114 3 50324989 50333813 Mepo3g04114 3 50324989 50333813 ECH
Mepo3g04114 3 50324989 50333813 Mepo4g02716 4 35903104 35922751 PCT