Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04113 ATGGGGACTCCTGTGAATATTATTGTGGGTTCTCATGTCTGGATCGAAGATCCAGATATATCTTGGGTTGATGGACAAGTTTCCAAAATCACTGGACAGGATGCAGAAATTGAAACGACCAATGGAAAGAAGGTTGTTGCAAAGTTATCAAAAATATTACCCAAAGATATGGAAGCTCCAGCTGGGGGAGTGGATGATATGACTAAATTGTCTTATTTGCATGAGCCTGGAGTGCTGGAAAATTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACCGGAAACATATTGATTGCAATAAATCCATTCCAAAGATTACCTCATCTTTATGATGCACACATGATGCAACAGTACAAGGGAGCACCATTTGGAGAGTTGAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATGAAAAGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACGAAAATGCTTATGCAATACCTTGCTTACTTAGGTGGTAGGGCAGCCACTGAAGGACGAACGGTTGAACAACAAGTTCTTGAATCAAATCCAGTTTTGGAAGCATTTGGTAATGCTAAAACTGTCAGGAATAACAATTCCAGGCAAGTCTTCCTTACATGTGAGCATCGTTTTGGTAAGTTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGCGCAGCCATTCGTACATACCTTCTTGAGAGATCGCGGGTTTGCCAAGTTAATGACCCAGAACGTAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCACAAGAGGAAATCGAGAAATACAAATTAGGACATCCTAAAACATATCACTACCTTAACCAGTCGAAATGCTATGAATTGGCTGATATAAGCGATGCTCGTGAGTATCTTGCCACCAGGAGAGCTATGGATATCGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGCAATATTGATTTTACCAAAGGAAAGGAAGTCGACTCATCGGTTCCAAAAGATGATAAAGCCAAATTCCACTTGAACACAACTGCTGAGCTCCTCATGTATGGATCAAAGTGTATTGTTGTTCAATGCCCATATGACTTTCAATTGCCTCTTAGATAA 1170 0.3949 MGTPVNIIVGSHVWIEDPDISWVDGQVSKITGQDAEIETTNGKKVVAKLSKILPKDMEAPAGGVDDMTKLSYLHEPGVLENLKIRYELNEIYTYTGNILIAINPFQRLPHLYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEKKSNSILVSGESGAGKTETTKMLMQYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRQVFLTCEHRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIEKYKLGHPKTYHYLNQSKCYELADISDAREYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFTKGKEVDSSVPKDDKAKFHLNTTAELLMYGSKCIVVQCPYDFQLPLR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04113 389 SMART MYSc_2a 57 389 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 Gene3D Myosin VI head, motor domain, U50 subdomain 316 369 - -
Mepo3g04113 389 FunFam Myosin heavy chain 260 315 - -
Mepo3g04113 389 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 Pfam Myosin head (motor domain) 64 369 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 ProSiteProfiles Myosin motor domain profile. 62 389 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 Gene3D Kinesin motor domain 63 259 IPR036961 -
Mepo3g04113 389 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g04113 389 PANTHER MYOSIN 54 372 - -
Mepo3g04113 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 370 IPR027417 -
Mepo3g04113 389 Gene3D - 260 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04113 Mepo-Chr3 50321775 50324295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04113 1 376 Myosins gene family AT1G54560 86.170 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04113 K10357 - gmx:100792816 672.93