Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04104 ATGGCTCCCGATGCTTCCGACGCACTTGCAGTTAGGCAGAAAGTTCAACACTTCCTCAACGCTGCTCGTACCGGCAATCTCGATCTCTTAAAGAAATTTGCGGAACAGTTAGACGAGGGCAAAGATTTATCCAAAACTGTGGATGCAATTAAAGACGCAAACAAGCGTGGAGCACTTCATTTTGCTGCTCTTGAAGGACAAACTCAGATTTGCAGTTATCTTGTAGATGATTTGAAGCTTCGTATCGATGATAAAGATGATGACGGTGAAACTGCTCTCATTCATGCTGCTCGTCAGGGACACACTGCCACTGCTAAGTATCTTATCGATCATGGTGCTGATCCTACCATTGCCAGCAATTTAGGAACCACGCCTTTGCATCATTCTGCTGGAATAGGAGATACGGATTTACTTGAGCATTTGCTGTCCAGAGGAGTTAATCCTGACTTAGAAAGTGATTCGGGAACCCCGTTGGTTTGGGCGGCTGGTCATGCTCAAGAAGTTGCTGTCACTGTTCTATTAAAACATGGTGCAAATCCCAATGCTGAAACTGATGATGGCATTACCCCACTCATTTCATCTGTTGCAGCTGATTCTTTGGCATGCTTAGAGCTGTTAATACAGGCAGGTGCTAAAGTAAATGTTAGTGCTGGTGGAGCAACTCCTTTGCACATTGCAGCTGATAATGGAAGTCTAGAACTTATAAATTCCTTGTTGAAAGCAGGAGCTGATCCTAATGTCTCTGATGAGGATGGTGTTAAGCCAATACAGGTTGCAGCTGGAAGGGGCAATCGTGGAGCTGTTGAGATATTATTCCCCGTGACATCCAAAATTGATGCTATTCCTTCTTGGACTATTGATGGGATACTTGAGCATGTGCAATCAGAAAGTAAAAAGCAGCAGGATAAATTGGTAAATGCTAAAGAAAATAACCGGTCTGTGGATGCTGCTGTTTCTAGAGAGCAAAATATCCCTGAGGTGTCACCTGAAGCCAAAAAGAGAGCAGCAGAATCAAAATCAAGAGGGGATGAGGCTTTTAAACGGAATGACTATCATACGGCTATAGATTCCTATACACAAGCAATTGATTTGAATCCCAGTGATGGTACATTGCTTTCAAATAGAAGTCTATGTTGGATGAAGCTAGGTCAAGCTGAGCAGGCTTTAGCTGATGCAAAGGCATGTAGAGTATTAAGACCAGATTGGTCCAAAGCTTGTTATAGGGAAGGTGCAGCCTTGCGTTTGTTGCAGAGGTTTGATGAAGCTGCAAATGCTTTTTACGAGGGAGTAACACTTGACCCTGAGAACAAGGAGCTTGTAAATGCGTTCAGGGAAGCTGTTGAAGCTGGAAGGAAATTTCATGGCACAACTAAAGATAAATCGTAG 1386 0.4343 MAPDASDALAVRQKVQHFLNAARTGNLDLLKKFAEQLDEGKDLSKTVDAIKDANKRGALHFAALEGQTQICSYLVDDLKLRIDDKDDDGETALIHAARQGHTATAKYLIDHGADPTIASNLGTTPLHHSAGIGDTDLLEHLLSRGVNPDLESDSGTPLVWAAGHAQEVAVTVLLKHGANPNAETDDGITPLISSVAADSLACLELLIQAGAKVNVSAGGATPLHIAADNGSLELINSLLKAGADPNVSDEDGVKPIQVAAGRGNRGAVEILFPVTSKIDAIPSWTIDGILEHVQSESKKQQDKLVNAKENNRSVDAAVSREQNIPEVSPEAKKRAAESKSRGDEAFKRNDYHTAIDSYTQAIDLNPSDGTLLSNRSLCWMKLGQAEQALADAKACRVLRPDWSKACYREGAALRLLQRFDEAANAFYEGVTLDPENKELVNAFREAVEAGRKFHGTTKDKS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04104 461 Coils Coil 290 310 - -
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat region circular profile. 121 153 - -
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat region circular profile. 186 215 - -
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat profile. 121 153 IPR002110 GO:0005515
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat profile. 186 218 IPR002110 GO:0005515
Mepo3g04104 461 ProSiteProfiles TPR repeat profile. 335 368 IPR019734 GO:0005515
Mepo3g04104 461 PRINTS Ankyrin repeat signature 122 137 IPR002110 GO:0005515
Mepo3g04104 461 PRINTS Ankyrin repeat signature 169 183 IPR002110 GO:0005515
Mepo3g04104 461 SUPERFAMILY TPR-like 334 446 IPR011990 GO:0005515
Mepo3g04104 461 SUPERFAMILY Ankyrin repeat 18 272 IPR036770 -
Mepo3g04104 461 Gene3D - 154 337 IPR036770 -
Mepo3g04104 461 Pfam Tetratricopeptide repeat 404 436 IPR019734 GO:0005515
Mepo3g04104 461 Pfam Tetratricopeptide repeat 342 368 IPR019734 GO:0005515
Mepo3g04104 461 ProSiteProfiles TPR repeat profile. 403 436 IPR019734 GO:0005515
Mepo3g04104 461 Gene3D Tetratricopeptide repeat domain 338 448 IPR011990 GO:0005515
Mepo3g04104 461 MobiDBLite consensus disorder prediction 326 345 - -
Mepo3g04104 461 Gene3D - 8 79 IPR036770 -
Mepo3g04104 461 Gene3D - 80 153 IPR036770 -
Mepo3g04104 461 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 453 - -
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat region circular profile. 218 250 - -
Mepo3g04104 461 Pfam Ankyrin repeats (3 copies) 170 249 IPR002110 GO:0005515
Mepo3g04104 461 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat profile. 88 120 IPR002110 GO:0005515
Mepo3g04104 461 MobiDBLite consensus disorder prediction 304 345 - -
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat region circular profile. 88 114 - -
Mepo3g04104 461 SMART ANK_2a 121 150 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 153 182 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 251 280 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 186 215 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 218 247 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 54 84 IPR002110 GO:0005515
Mepo3g04104 461 SMART ANK_2a 88 117 IPR002110 GO:0005515
Mepo3g04104 461 SMART tpr_5 369 402 IPR019734 GO:0005515
Mepo3g04104 461 SMART tpr_5 403 436 IPR019734 GO:0005515
Mepo3g04104 461 SMART tpr_5 335 368 IPR019734 GO:0005515
Mepo3g04104 461 ProSiteProfiles Ankyrin repeat profile. 153 185 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04104 126 282 Ion Channels AT2G25600 31.959 8.13e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04104 - - gmx:100798118 759.985