Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04097 ATGTTATCGATGGATGAAGTAACGGAACAATATTTGTTGATGTCAGATGTCGGGAACGAAACAAAGATGAATCAGAATGATTCAGAATTAGATTTTCAACAATTACTAAAGAAAATCGATAAAGGAAAAAATACCGTAGAACTTTATTCTTCACTTTTAACTTCTTCCACGGTTGTTGATCATAATAATATTATTGATTTAGAGAGAAATGATTGTCAAACTCTTCTCAAGACCAAACTTGATGTTGAATGCGTCGCCTTTGCTATGACTTGGAAAACATTTGTATGGGAAATTTATAAAAGTTATCCGTCTTTTGTATTTTATCTATCTGTAGAGTGTGGCCCTGCTGGAGCTCCTTCCATGCCACAGAAACCTGTTGTTACAGCAATCAGGTCAACAACAAGTGGATCCTTTGACAAAGAGGAAGCTTATCAGGGAGAGGGAGACAATAACCCTTCCAATGCAAAACGAGTTAAGAGGATGCTCCAAAATAGGGAATCAGCTAAACGCTCGAGATATAGAAAGATAGCTGAAAATACTAAGCTTGAAACACAGGTCTCTGCATTAAGAGGTGATAAGTCTTCATTGATGAAGCGTTTATCAGATGTGAGCCAAAAATATAACGATTCTGTTGTTGATAACAGAATATTAAACGCTGATTTTGAAACAATAAAAGCGAAGGTGAAGGCGGCTGGAGAGAGATGTTTAAGATTAACTGGATCAATTCCGGCGTTTAATGCAATGCCAATGTGTGAGGCATCATCAATGGGAATGTCATTACTTGATGGAAGTCCTTCTGAGTTATCAGCTGATGCATATGTGCCTGTGCAAGAAGATCCAAATAATTTCTTTTTTCAACCAACTTTTAATAATCCAATGTCCAGTCATGATATTAGAAGAGTCAATAATGGGTTGGGAGGCATCATTTCTTCAGTTGACAGTGTGCAGAAGAACACAGCAACATGA 966 0.3706 MLSMDEVTEQYLLMSDVGNETKMNQNDSELDFQQLLKKIDKGKNTVELYSSLLTSSTVVDHNNIIDLERNDCQTLLKTKLDVECVAFAMTWKTFVWEIYKSYPSFVFYLSVECGPAGAPSMPQKPVVTAIRSTTSGSFDKEEAYQGEGDNNPSNAKRVKRMLQNRESAKRSRYRKIAENTKLETQVSALRGDKSSLMKRLSDVSQKYNDSVVDNRILNADFETIKAKVKAAGERCLRLTGSIPAFNAMPMCEASSMGMSLLDGSPSELSADAYVPVQEDPNNFFFQPTFNNPMSSHDIRRVNNGLGGIISSVDSVQKNTAT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04097 321 SMART brlzneu 152 216 IPR004827 GO:0003700|GO:0006355
Mepo3g04097 321 Pfam bZIP transcription factor 155 207 IPR004827 GO:0003700|GO:0006355
Mepo3g04097 321 SUPERFAMILY Leucine zipper domain 156 206 IPR046347 GO:0003700|GO:0006355
Mepo3g04097 321 Gene3D - 155 209 - -
Mepo3g04097 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 154 208 IPR004827 GO:0003700|GO:0006355
Mepo3g04097 321 Pfam Basic leucine-zipper C terminal 223 318 IPR020983 -
Mepo3g04097 321 CDD bZIP_plant_GBF1 157 208 IPR045314 GO:0003700|GO:0006355
Mepo3g04097 321 PANTHER BASIC LEUCINE ZIPPER 63 17 306 - -
Mepo3g04097 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 159 174 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04097 Mepo-Chr3 50173011 50176050 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04097 116 242 bZIP Transcription Factor Family AT5G24800 44.928 3.18e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g04097 bZIP_C 8.1e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04097 3 50173011 50176050 Mepo3g04097 3 50173011 50176050 ECH
Mepo3g04097 3 50173011 50176050 Mepo4g03295 4 42514099 42519635 PCT