Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04096 ATGGAAAGAGTGTTATCAATTGCTGAAATAACGGAGCAATATTGGTTGACTTCGAAAGCGTGCAAGGAAGGAGATACAACAAAGATGAATCGGAGTGATTCAGAATGGGCTTTCCAAAAGTTTTTAAGGGAACAACAAGCTGCTGAAGAAGCAGAAGCTAGTACTGCAAAGCCTTCTTCATCTTCAACTTCAACTTCAACTTCTTCTTCCACCGTTGATGTCAATCTCAAAATCAATAATAATAATAATAATATTGATTCAGATGATTATCAAGCTCTTCTCAAGACTAAGCTTGATCTTGCTTGCGCCGCCGTCGCTAAGTCTCGGGGATCTTTGGTCAAATCTAAGGATCCTGACAATGGATCACAGCCATCTTATCCTTCTGAACTTGGACCTCTGGCTACTTTGAAAGAATGCGGCCCTTCCAGAAATGATCCATCTAAATTACAAAATAAAGATATCAAAGTTGCTGTTGGGGCTCCTTGCATGCCAAAGAAACCTGCTGTTACAATGAAGTCAACAACAAGTGGATCATCAGACGATGAGGAAGCTGAGGGAGAGATTAATATGAATGGAGACAACCCTACTGATGCAAAACGAGTAAGAAGGATGCTCTCTAATAGGGAATCAGCTAGACGCTCAAGACGAAGAAAGCAAGCTCATTTAACTGAGCTTGAAACACAGGTCTCTGAATTAAGAGGTGAAAATTCTTCATTGTTAAAGCGTTTAACAGATGTGACCCAAAAATTCAATAATTCTGCTGTTGACAACAGAATATTAAAAGCTGATGTTGAAACATTAAGAGCGAAGGTGAAGATGGCTGAAGAGACAGTTAAAAGATTTACTGGATCGAACCCAGTGTTTAATGCAATGTCTGAGGTATCATCAATGGGAATGTCATTATTTGATGGAAGTCCTTCTGAGTCATCAGCTGATGCATCTGTGCCTGTGCAAGAAGATCCAAATAATCACTTTTTTCAACCTTTATCTAATAATCTAATGTCCAGTCATGATATGAGAGGAGCCAATAATAGATCGGGAGGCATTATTTCTTCAGCTGAAAGTGTGCAGAAGAACACCGCAGCAGGTGGGAACAAGATAGGACGAACAAATTCCCTGCCACGGGTGGCTAGCTTGGAACATCTACAGAGTCGAATTCGTGGTGGTGCCGAAGAAGACAAGTGA 1185 0.4059 MERVLSIAEITEQYWLTSKACKEGDTTKMNRSDSEWAFQKFLREQQAAEEAEASTAKPSSSSTSTSTSSSTVDVNLKINNNNNNIDSDDYQALLKTKLDLACAAVAKSRGSLVKSKDPDNGSQPSYPSELGPLATLKECGPSRNDPSKLQNKDIKVAVGAPCMPKKPAVTMKSTTSGSSDDEEAEGEINMNGDNPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRLTDVTQKFNNSAVDNRILKADVETLRAKVKMAEETVKRFTGSNPVFNAMSEVSSMGMSLFDGSPSESSADASVPVQEDPNNHFFQPLSNNLMSSHDMRGANNRSGGIISSAESVQKNTAAGGNKIGRTNSLPRVASLEHLQSRIRGGAEEDK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04096 394 MobiDBLite consensus disorder prediction 45 71 - -
Mepo3g04096 394 Pfam Basic leucine-zipper C terminal 266 390 IPR020983 -
Mepo3g04096 394 MobiDBLite consensus disorder prediction 109 150 - -
Mepo3g04096 394 FunFam BZIP transcription factor 197 248 - -
Mepo3g04096 394 Gene3D - 198 252 - -
Mepo3g04096 394 SUPERFAMILY Leucine zipper domain 199 249 IPR046347 GO:0003700|GO:0006355
Mepo3g04096 394 Pfam bZIP transcription factor 198 248 IPR004827 GO:0003700|GO:0006355
Mepo3g04096 394 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Mepo3g04096 394 MobiDBLite consensus disorder prediction 336 394 - -
Mepo3g04096 394 MobiDBLite consensus disorder prediction 167 199 - -
Mepo3g04096 394 MobiDBLite consensus disorder prediction 336 367 - -
Mepo3g04096 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 251 IPR004827 GO:0003700|GO:0006355
Mepo3g04096 394 Coils Coil 257 277 - -
Mepo3g04096 394 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Mepo3g04096 394 MobiDBLite consensus disorder prediction 115 129 - -
Mepo3g04096 394 PANTHER BASIC LEUCINE ZIPPER 63 1 389 - -
Mepo3g04096 394 Coils Coil 208 242 - -
Mepo3g04096 394 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04096 Mepo-Chr3 50166779 50170010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04096 1 288 bZIP Transcription Factor Family AT4G02640 37.231 6.84e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g04096 bZIP_C 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04096 K25784 - gmx:778137 419.468