Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04084 ATGGTTCCATCACTTTGTGCCAATGGTTGTGGTTTCTATGGTTCTCCTTCAAACAAGAACCTTTGTTCAAAGTGTTACAATGTTTATCTCAAAGAAAACATTGTTCTTGAGTCATCGTCTTCTTGTCCTTCAAAGAACCCTAATATCAATGATATTTGTGATGTTGTGGCAGCTATTTCTCTCATTGACAATGATAACATGAAGGAGAAGAAAAATAGGTGCAAGAGTTGCAACAAAAAAGTGGGACTAACAGGGTTCAAGTGCCGTTGTGGTGATGTATTTTGTGGAATGCATAGATACCCAGAAGAACATACATGCAAAGTGGATTTAAAAGAGATTGGTCGCCAAATATTACAGAAACAAAATCCTTTGTGCATGGGTGATAAGTTAGAACACCGGATCTAG 405 0.3753 MVPSLCANGCGFYGSPSNKNLCSKCYNVYLKENIVLESSSSCPSKNPNINDICDVVAAISLIDNDNMKEKKNRCKSCNKKVGLTGFKCRCGDVFCGMHRYPEEHTCKVDLKEIGRQILQKQNPLCMGDKLEHRI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04084 134 ProSiteProfiles Zinc finger AN1-type profile. 68 114 IPR000058 GO:0008270
Mepo3g04084 134 SMART AN1_Zf_4 74 111 IPR000058 GO:0008270
Mepo3g04084 134 SUPERFAMILY AN1-like Zinc finger 64 128 IPR035896 -
Mepo3g04084 134 Gene3D - 1 51 - -
Mepo3g04084 134 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 131 - -
Mepo3g04084 134 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Mepo3g04084 134 FunFam Zinc finger AN1-type containing 6 52 129 - -
Mepo3g04084 134 Pfam AN1-like Zinc finger 74 108 IPR000058 GO:0008270
Mepo3g04084 134 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Mepo3g04084 134 Gene3D - 58 128 IPR035896 -
Mepo3g04084 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 33 - -
Mepo3g04084 134 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04084 Mepo-Chr3 50055586 50055990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04084 5 131 C2H2 Transcription Factor Family AT3G52800 40.260 1.90e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04084 - - tpra:123902604 208.764