Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04079 ATGGGGAAGGCAAGCAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGAGAACTTCAAGCAGATTGATACATTCTGCCCTGAGAATAAGACCGCAAACACGGTTAATAGTAGTAGCAGCAGTAATAGTAATAAGATGGTAGTGAAGCGCAGATGGAGCTTCCGAAAACTAACAAGTGGAAGATCAACGGGCAAGGTAGTAGCTCATAAAATTTCCAAGTCTTTTGATTCAAACGACTCTCCAAAATTGCAAATACAAGGCTTGTTCTATACTCAATCCCCAAGGTTTCGTCCAACAGCTGCTGAATTTGTGAAAAAAGCTGCTACAAAGATTCAAGCTTCCTTTCGCTCCTACTTGGCAAGGAGAGCATTGCATGCTTTAAGAGGATTAGTGAAGTTACAGGCATTAGTGAGGGGTCACCTTGTAAGGAAGCAAACAACTGCAACACTACGTGGAATGCATGCGTTGATGTCGATACAAGTTAGAGCACGAATTAAAAGGATTAAGATGGCAGAAGAAGTAAATCCCCTCGAAATACAACCTCCACAACACACAAAAATTCCCTCCTTCAAAGGTCAAATGATACAACAAAATCAATATTCAAAGAATATGAGCATGGAAGAAATGTTGGAGGTTATGAGAAGTAGAAGTGGTCCACTAGATGTTAAAAGCAGAAAGTATGACTCAATGGCATATTATTCAAGAAGTCGATCAATTTCAAAACGAGAAAATCAATTGAAGAAGGAGAATCACAACAATAATCCTAGAACAATTCTCACAGCACCAAACAGCCCAGAAAAGTACTACGGTGACATGATTGAATATATGGACCCAACAACCTTATCAACATCTCAGCGTCACATTGTGCCTCCTAGAAAATCATGGTCATCACCAAGTTACATGAACAAGACAGAATCTTCTAGGGCAAAAACAAGGTCTATTAGTGAACCAAGACAAAGACCTAAACAGGGAACAGAACAAAGAAACAAGTCTATAGAATTTGCTTCTTTGAAGCAAAATATGTTGTCAAACTCAGCACGCTATGATCATTGGGTTGTAAATTCAATGAAGGAGAGTAAGCGTGATTCCTTTGGCAGCTATGCGGTTACTACTAGTGATGATTTCTATTACTCGTGA 1140 0.3912 MGKASKWIRNLLLGKKEENFKQIDTFCPENKTANTVNSSSSSNSNKMVVKRRWSFRKLTSGRSTGKVVAHKISKSFDSNDSPKLQIQGLFYTQSPRFRPTAAEFVKKAATKIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEVNPLEIQPPQHTKIPSFKGQMIQQNQYSKNMSMEEMLEVMRSRSGPLDVKSRKYDSMAYYSRSRSISKRENQLKKENHNNNPRTILTAPNSPEKYYGDMIEYMDPTTLSTSQRHIVPPRKSWSSPSYMNKTESSRAKTRSISEPRQRPKQGTEQRNKSIEFASLKQNMLSNSARYDHWVVNSMKESKRDSFGSYAVTTSDDFYYS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04079 379 MobiDBLite consensus disorder prediction 282 330 - -
Mepo3g04079 379 Gene3D - 102 158 - -
Mepo3g04079 379 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Mepo3g04079 379 SMART iq_5 104 126 IPR000048 GO:0005515
Mepo3g04079 379 SMART iq_5 127 148 IPR000048 GO:0005515
Mepo3g04079 379 MobiDBLite consensus disorder prediction 236 266 - -
Mepo3g04079 379 MobiDBLite consensus disorder prediction 310 328 - -
Mepo3g04079 379 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mepo3g04079 379 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Mepo3g04079 379 Pfam Protein of unknown function (DUF4005) 266 351 IPR025064 -
Mepo3g04079 379 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Mepo3g04079 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 147 IPR027417 -
Mepo3g04079 379 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Mepo3g04079 379 MobiDBLite consensus disorder prediction 282 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04079 Mepo-Chr3 50022527 50024936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04079 1 334 IQD Protein Family AT4G14750 35.530 1.75e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04079 - - psat:127129486 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04079 3 50022527 50024936 Mepo3g04079 3 50022527 50024936 ECH