Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04067 ATGGCTTCACAGCAACACGACACCGTTTTCCCCGAAGAAGACATCGACGACGAAGAAGACGAATTTCACGAATACGAAGAAGAAGATGAAGAAGACGACGACGTTTTAGTTGATGACGAAGAAAACGATCTTCCATCTGCTTCTGCTTCTGCTTCTATCTCCGTTCCCTCCGTCACCGTCGCCGTTCCCGGTGGAGCTCTCAGACCTCCAATTCTAACACCAACCGCAACCACGATCATCTTCGCCGACTCCACCTTCTCCTCCGATTCCAAACGTCAACGTTTGGATCAAATTGAGGAGAAAAAACCACCTCTGGTTGAAGATTCACGCAAGCTTTTTCAACGTCTATGGACAGACGAAGATGAAATGGAACTGTTACAAGGCTTTCTCGATTACACAACACAGAGAGGTTCTTCTCATCACAACGACACTGCTCAATTCTATGATCAAATCAAATCGAAGCTTCAACTCGATTTCAACAAAAACCAGCTCGTTGAGAAGATCCGAAGGTTGAAGAAGAAATACAGAAACGTTGTAAGCAAAATGAGCTCCGGTAAGGAATTCGTCTTCAAAACTGCTCACGATCAAGCCACGTTTGAAATCTCTCGCAAGATCTGGAACAACGTGGCGCCAATCGCCGGTGATATTGCTATAGACGATGATGAAATCAATCTCAATCCAAGTCCTAACCCTAATCTCAATTTCACTCCCGTAATTCTCAAAAGCGAGGTAAATTCAACCACGCGGAAGCGTTCGCGGCCTCGATCCGTTTCTATCAGAAGCTTTGAGAAGCGTGAATCAAATGATGCAGTAGCATCAAACAGAGATCGTGATTATCTCAATATCAACCTCAATAATCCTAATCCCTATCCTAATCACAATCACAGTCCTAATCCTAATGCTTATGCTACAACTGCTACAGTTAATCCTGCAATAACACCTACCATTACTACTCCTAATGTTACTACTAATGCTGCAATTCATGCTAATAACTATAGTAATAATTGTAGCAGCGCTGGGAATGGTGTTGCTGGTGTGATTGAAGAGACAGTGAGGAGTTGTTTATCGCCGTTTAAGGAATTGATGGCTAGTGCAATGGGAGGAGGACTGTTTGGATCGCGTGGAAGTTTCGCAATGAATCCATTACCGTTTCAGATGGTGAATTTAGGTTTTGGAGGTGGAGAATTGGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAATTGGAAGTGTATTCAAAGAGGTTGGAGTTAGTTCAAGATCAGATCAAAACATCTCTTGATGAATTGCGTTCAGTTGGTGGATCAGCTCAAATGTGA 1320 0.4326 MASQQHDTVFPEEDIDDEEDEFHEYEEEDEEDDDVLVDDEENDLPSASASASISVPSVTVAVPGGALRPPILTPTATTIIFADSTFSSDSKRQRLDQIEEKKPPLVEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVVSKMSSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAIDDDEINLNPSPNPNLNFTPVILKSEVNSTTRKRSRPRSVSIRSFEKRESNDAVASNRDRDYLNINLNNPNPYPNHNHSPNPNAYATTATVNPAITPTITTPNVTTNAAIHANNYSNNCSSAGNGVAGVIEETVRSCLSPFKELMASAMGGGLFGSRGSFAMNPLPFQMVNLGFGGGELVDEKWRKQQILELEVYSKRLELVQDQIKTSLDELRSVGGSAQM 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04067 439 MobiDBLite consensus disorder prediction 11 41 - -
Mepo3g04067 439 MobiDBLite consensus disorder prediction 245 276 - -
Mepo3g04067 439 MobiDBLite consensus disorder prediction 1 50 - -
Mepo3g04067 439 PANTHER BNAANNG10740D PROTEIN-RELATED 4 429 IPR007592 GO:0006355
Mepo3g04067 439 Coils Coil 161 181 - -
Mepo3g04067 439 MobiDBLite consensus disorder prediction 246 273 - -
Mepo3g04067 439 Pfam Protein of unknown function, DUF573 113 207 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04067 Mepo-Chr3 49913062 49914929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04067 1 433 GeBP Transcription Factor Family AT5G28040 39.112 8.41e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mepo3g04067 DUF573 3.4e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04067 - - psat:127132285 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04067 3 49913062 49914929 Mepo4g03318 4 42735825 42736958 PCT