Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04051 ATGGGATGTGTGATTGGTCGCCAAGCCTCGTCAAACAAGGTTGATGAATTCCAAACTAACAGGAACAAGGTTGATGAAGCTTCTGTGGCCACGGAGAAGAATGTGGTAGAGACTGAGAATGACGAGAAGAAGAAGAGTGATGATAGGGTTCAACAGTCTCGAAGAACAAAGCCGAATCCAAGGCTAAGTAATCCACCTAAACATTTACATGGTGAACAGGTTGCTGCTGGATGGCCATCTTGGCTCACTGCTGTCTGTGGAGAAGCTCTCACTGGTTGGATTCCGCGAAAGGCCGACACATTTGAAAAAATCGATAAGATTGGGCAAGGTACTTATAGTAATGTGTACAAAGCTAAAGACTCCATGACCGGTAAAGTTGTTGCTCTCAAGAAGGTTCGATTTGACAATTTAGAACCCGAGAGCATTAAATTCATGGCTAGAGAGATTCTTATTCTGCGAAGGTTGGATCATCCAAATGTTATTAAGTTGCAAGGTTTAGTTACATCAAGGATGTCCTGTAGTTTGTATTTGGTGTTTGATTACATGGAGCATGATTTAGCCGGACTTGCTGCTAGCCCGGTAATCAGGTTTACAGAGTCTCAGATAAAATGTTATATGAATCAACTACTCTCGGGACTTGAGCATTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGCTTGGCATCCTTTTTTGATCCAAACTATAGGCATCCCATGACTAGTCGTGTAGTAACCCTTTGGTATCGGCCCCCTGAGTTGCTTCTTGGGGCCACAGATTACGGTGTGGGTATAGACCTCTGGAGTGCTGGATGTATTTTAGGAGAGTTATTGGTCGGGAAACCAATTATGCCTGGCCGTACAGAGGTGGAGCAACTGCATCAGATATATAAACTATGCGGTTCACCTTCTGATGAATACTGGAAGAAGTCAAAGTTGCCCAATGCTACATTGTTTAAACCTCGAGAACCATACAAGAGATGCATAAGAGAGACATTCAAAGGTTTTCCACCGTCTGCTCTACCCCTTATTGATAAACTTCTTGCGATTGATCCTGTAGAACGGGAAACCGCCTCAGATGCTTTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATACCCCCCAAGCAAAGAAATGGATGCTAAAAGACGGGACGACGAAGTGAGGAGACAAAGAGCTGCAAGCAAAGCTCAGGTTGATGGCTCAAAGAAGCATCGTACGCGTGAACGTTCTATGAAAGCTATGCCTGCTCCCGAAGCCAATGCCGAGCTTCAGTTCAATATTGATAGAAGACGTCTAATTACTCATGCAAATGCCAAGAGCAAGAGTGAAAAGTTCCCTCCACCTCATCAAGATGGACAACTTGGCTTTCCTTTGGGATCTTCACGTCATATTGATCCAGATACTATTCCTACCGATATATCTTTCACTTCAACCACATATACCTATTCAAAGGAACCATTCCAAGCTTGGTCGGGTCCAATTGGTAATGCTGCCGAAATTGGATTGCCAAAGCAGAAGAAACACACTGCAGGAGAGGCATGGGATTTAATAAAACTACATAAAGGTGCCCCCAAAGATAAGTTTAAAGGAAAGGCAATTATAGCATAG 1692 0.4297 MGCVIGRQASSNKVDEFQTNRNKVDEASVATEKNVVETENDEKKKSDDRVQQSRRTKPNPRLSNPPKHLHGEQVAAGWPSWLTAVCGEALTGWIPRKADTFEKIDKIGQGTYSNVYKAKDSMTGKVVALKKVRFDNLEPESIKFMAREILILRRLDHPNVIKLQGLVTSRMSCSLYLVFDYMEHDLAGLAASPVIRFTESQIKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNYRHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLVGKPIMPGRTEVEQLHQIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKGFPPSALPLIDKLLAIDPVERETASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEVRRQRAASKAQVDGSKKHRTRERSMKAMPAPEANAELQFNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSRHIDPDTIPTDISFTSTTYTYSKEPFQAWSGPIGNAAEIGLPKQKKHTAGEAWDLIKLHKGAPKDKFKGKAIIA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04051 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mepo3g04051 563 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Mepo3g04051 563 PANTHER CELL DIVISION PROTEIN KINASE 99 389 - -
Mepo3g04051 563 FunFam probable serine/threonine-protein kinase At1g54610 88 183 - -
Mepo3g04051 563 FunFam probable serine/threonine-protein kinase At1g54610 184 425 - -
Mepo3g04051 563 SMART serkin_6 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04051 563 MobiDBLite consensus disorder prediction 18 55 - -
Mepo3g04051 563 MobiDBLite consensus disorder prediction 392 444 - -
Mepo3g04051 563 Gene3D Transferase(Phosphotransferase) domain 1 184 425 - -
Mepo3g04051 563 Gene3D Phosphorylase Kinase; domain 1 88 183 - -
Mepo3g04051 563 MobiDBLite consensus disorder prediction 403 440 - -
Mepo3g04051 563 ProSiteProfiles Protein kinase domain profile. 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04051 563 MobiDBLite consensus disorder prediction 1 70 - -
Mepo3g04051 563 Pfam Protein kinase domain 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04051 563 SUPERFAMILY Protein kinase-like (PK-like) 95 392 IPR011009 -
Mepo3g04051 563 CDD STKc_CDK9_like 101 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04051 Mepo-Chr3 49794321 49799266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04051 93 425 Core Cell Cycle Gene Families AT5G10270 52.436 4.58e-120 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo3g04051 Pkinase 1.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04051 K08819 - gmx:100786837 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04051 3 49794321 49799266 Mepo4g03335 4 42942438 42949664 PCT