Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04030 ATGGCGAATGATGATGATCAGAAAGATTATTGTATATGGGACCCTAAAACAAGTCCTGCTAATAGACTAAAGAAGATCTCAATTGAAGAAGCTTTTTTTAATGCTAAACACAAATCTGCTTCTGCCAAAGAAGATTGCTTCAGTGGCTTGGATGGTAATCAACAATCTGAATTGCCTACCAGTTGTACAAACTTGAGGGCAAGATTTCAATGGGACAAGGCATTGAAACTATTGAAAAAAAGATCAATTAACAACACATCCTCCTGCCCTCCTTTTTGTGTGCCGCTACCAAACACACAAGATCCTACTCTATCTAATTTAGACAACTTCAAATCTTCTTTGGTCAATTTCACTCTCTCTGAACTCAGAAATGCAACCAACAATTTTAGCAAAGAAAATTTAATTGGGAGAGGAGGATTCGCTGAGGTTTACAAGGGTCGCCTCTTAGATGGACAGCTCATAGCGGTTAAGCGGCCGAATAAAGGGACTTCAGATGAGAGGACATCAAACTTTCTATCTGAGCTAGGCATTATTGCTCATCTCAACCATCCTAACACTGCCAAGCTTATTGGATGTGGTGTAGAAGGAGAAATGCACCTTGTGTTTCAACTATCTCCATTGGGAAATTTAGATTCTCTTCTTCATGGTTCCAATAAAAACAAATTAGATTGGACTAGAAGGTATAGAATTATTGTGGGGATTGCTGATGGACTCCTATATCTTCATGAGAATTGTCAAAGGCGAATCATTCATAGAGATATTAAAGCGGAGAATATTCTTCTCACAGAGAACTTTGAGCCTCAGATTTGTGATTTTGGACTAGCAAAGTGGTTACCAGAACAATGTAGCCACCATAATGTATCAAAATCTGAAGGCACATTTGGGTATTTTGCTCCTGAATATCTTATGCATGGCATAGTCGACGAGAAAACTGATGTTTATTCTTTTGGTGTCCTACTTTTGGAGATTATAACTGGCCGTAGGGCTTTGGACCATTTGCACCAAAGTCTCGTGTTATCGGCAAAACCTTTGCTTGATGCTAATAACATCAAGGACCTTGTTGATCCTTCTCTTGGAGATGATTATGACCAAGAACAAATGGATCGTGTTGTTTTGACCGCGTCTCTGTGTGTTGAGAACTCGCCTATCTTACGCCCCCGAATGAGTCAGGAATTTGCAAATGAATGTCCAAGGCAGTCCCTCCAAAGAGCATACTCAGAGGGTTACTGA 1230 0.3992 MANDDDQKDYCIWDPKTSPANRLKKISIEEAFFNAKHKSASAKEDCFSGLDGNQQSELPTSCTNLRARFQWDKALKLLKKRSINNTSSCPPFCVPLPNTQDPTLSNLDNFKSSLVNFTLSELRNATNNFSKENLIGRGGFAEVYKGRLLDGQLIAVKRPNKGTSDERTSNFLSELGIIAHLNHPNTAKLIGCGVEGEMHLVFQLSPLGNLDSLLHGSNKNKLDWTRRYRIIVGIADGLLYLHENCQRRIIHRDIKAENILLTENFEPQICDFGLAKWLPEQCSHHNVSKSEGTFGYFAPEYLMHGIVDEKTDVYSFGVLLLEIITGRRALDHLHQSLVLSAKPLLDANNIKDLVDPSLGDDYDQEQMDRVVLTASLCVENSPILRPRMSQEFANECPRQSLQRAYSEGY 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04030 409 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 105 204 - -
Mepo3g04030 409 ProSiteProfiles Protein kinase domain profile. 129 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04030 409 PANTHER OS08G0249100 PROTEIN 36 390 IPR046958 -
Mepo3g04030 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mepo3g04030 409 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Mepo3g04030 409 SUPERFAMILY Protein kinase-like (PK-like) 106 390 IPR011009 -
Mepo3g04030 409 Gene3D Phosphorylase Kinase; domain 1 96 203 - -
Mepo3g04030 409 SMART serkin_6 129 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g04030 409 Gene3D Transferase(Phosphotransferase) domain 1 206 404 - -
Mepo3g04030 409 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 206 396 - -
Mepo3g04030 409 Pfam Protein tyrosine and serine/threonine kinase 132 339 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04030 Mepo-Chr3 49644743 49649777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04030 112 390 Trihelix Transcription Factor Family AT1G70460 43.750 1.81e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo3g04030 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04030 - - cam:101512181 524.242