Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g04017 ATGTGTTTACCAGAGGAAGAAATGGCACTAGAACCAACTCTACTATATCCACAAGACCCTTTCAGCTATGGATTCAACAAAGACCACTACAATTACAACCTGTTAACAGATTCTGAAGCAAACTTTGACTACACCAACTTCAACCTTGAAAATGAAGAACATGGTTTTGTTTCTACTTTTCTCATCAAGAACCAACAAACACAGAATTATCCTTATGGAAATTGGAGTAACATTTGTTCATCTTCTTCACCACCACCACAATCATTGTTGCCACACATGGATGAAGTGTCAAATCCATCTTTAGATAGCTCAATTTCCACTCGTTCTCGCTCCAAGAAACGCAGAGTCAAAACAAGTAAGAATAAGGAAGAAATTGAGAATCAGAGAATGACTCACATTGCTGTAGAACGAAACAGGAGAAAGCAAATGAATGAGTATCTCTCTGTTCTTAGATCTCTCATGCCTGAATCTTACGTCCAAAGGGGTGATCAAGCATCAATTATAGGGGGTGCTATTAACTTTGTTAAGAAGCTTGAGCAGAAGCTACAATTTCTTGGTGTTCAGAAAGAAAAAAAGATTGAAAATAAAAAGAAGCCCTTTTCTGAATTTTTCACCTTTCCACAATACTCAACAAGTGAAAGTGTGTGTGAGTGTTCTGAGACAAAAATGGGAGAAATTGAGAAAATGGGTGGTGAAGTTCAATCTCTCAATATTGCTGATATTGAAGTGACAATGGTTGAAAGCCATGCAAATCTCAAAATAAGAACAAAGAAAAGACCAAAACAGCTCTTGAAGTTGGTTTCTAGTTTGCATGGATTGTGTCTCACAATCTTGCATCTTAATGTCACTACAGCTGATGAATTTGTCTTCTATTCTCTCAGTGTTAAGGTTGAAGATGATTGCAAGCTAGGATCAGTGGATGAGATAGCTGCAGCTGTATACCAAATGTTGGAAAGGATTCAACAAGAGTCATCAATCAATATATTGAATTAA 993 0.3686 MCLPEEEMALEPTLLYPQDPFSYGFNKDHYNYNLLTDSEANFDYTNFNLENEEHGFVSTFLIKNQQTQNYPYGNWSNICSSSSPPPQSLLPHMDEVSNPSLDSSISTRSRSKKRRVKTSKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYVQRGDQASIIGGAINFVKKLEQKLQFLGVQKEKKIENKKKPFSEFFTFPQYSTSESVCECSETKMGEIEKMGGEVQSLNIADIEVTMVESHANLKIRTKKRPKQLLKLVSSLHGLCLTILHLNVTTADEFVFYSLSVKVEDDCKLGSVDEIAAAVYQMLERIQQESSINILN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g04017 330 Gene3D - 112 190 IPR036638 GO:0046983
Mepo3g04017 330 PANTHER MAX DIMERIZATION, MAD 80 323 - -
Mepo3g04017 330 SMART finulus 133 184 IPR011598 GO:0046983
Mepo3g04017 330 Pfam Helix-loop-helix DNA-binding domain 128 179 IPR011598 GO:0046983
Mepo3g04017 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 191 IPR036638 GO:0046983
Mepo3g04017 330 MobiDBLite consensus disorder prediction 83 123 - -
Mepo3g04017 330 MobiDBLite consensus disorder prediction 83 106 - -
Mepo3g04017 330 Coils Coil 175 195 - -
Mepo3g04017 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 178 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g04017 Mepo-Chr3 49524950 49526340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g04017 8 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.319 9.03e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g04017 HLH 8.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g04017 - - gmx:100782243 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g04017 3 49524950 49526340 Mepo3g04017 3 49524950 49526340 ECH
Mepo3g04017 3 49524950 49526340 Mepo4g03374 4 43257360 43259125 PCT