Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03987 ATGGCTACTTTCACCTGTTCCGCCTCCGACCTCCATGCTCTCCTCGGCAGCAGCGCCAACTCCACCGCTGCTGCCGAATACATCTGTGGTATTTTTTTCTATGTTTTTGGTTTTGCCCTAGCTTTTGGAACACCTTCAAACGGTTTCATAGGAAAACATTTTTTCGGTCTCACTGATTTCCCTTCACAATCTTTTGATTACAGTTTTTTCCTCTTTCAATGGGCTTTTGCCATTGCTGCAGCAGGGATCACAAGTGGATCAATTGCTGAGAGAACACAATTTGTTTCTTATTTGATTTATTCGTCGTTTTTAACCGGTTTAGTCTATCCAATTGTTGCTCATTGGTTTTGGTCTGCTGATGGTTGGGGTAGTCCGGTTCGGTCTGAACATCTTTTGTTTGGTTCTGGTGTTATTGATTTTGCTGGTTGTGGTGTTGTTCATTTAGTTGGTGCTGTTGCTGGTTTTTGGGGTGCTTTTATTGAAGGACCAAGAATTGGTAGATTTGATCACGAGGGTAAAAGTGTTTCAATTAGAGGACATAGTGGTACTTTAGTTGTTATGGGAACTTTTTTACTTTGGTTTGGTTGGTATGGTTTTAACCCTGGTTCTTTTCTTAATATTGTGAAAGCTTATGGTGAAAGTGGTAATTACTATGGTCAATGGAGTGCTATTGGGAGGACAGCTGTCACAACTACATTGGCTGGATGTACTGCAGCTCTCACTACTTTGTTTGGTAAACGTATGCAAACAGGTCATTGGAGTGTTAGTGATGTGTGTAATGGTTTGCTTGGTGGTTTTGCTGCTATAACTGCAGGGTGTTCTGTTGTGGATCCATGGGCTGCTATAATTTGTGGATTTGTTGCTGTTTGGGTTTTAATTGGATGCAATTTGTTAGGTGAGAAATTTCACTATGATGATCCTCTTGAAGCTGCACAACTTCATGGTGGTTGTGGTACTTGGGGGATTATTTTCACTGCTTTGTTTGCTAAGAAACAATATGTTAATGAAGTTTATGCTGGTTCTCCTGATAGACCTTATGGATTGTTGTTGGGAGGTGGTGGAAGATTATTGGCTGCACATGTTGTTCAGATTTTGGCTATTGTTGCTTGGGTGAGTATTACTATGGGAACAATGTTTTTTCTTCTTCATAAATTGAATTTGCTTAGGTCTTCACCCGAGGAAGAGATGGAAGGTTTGGATTTAACTAGCCATGGTGGATTGGCTTATGAGTATCATGACGAGGTTGAAGAACAAGCCAAAAGACGTGCATTTGAAGCATAA 1281 0.4067 MATFTCSASDLHALLGSSANSTAAAEYICGIFFYVFGFALAFGTPSNGFIGKHFFGLTDFPSQSFDYSFFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVAHWFWSADGWGSPVRSEHLLFGSGVIDFAGCGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKSVSIRGHSGTLVVMGTFLLWFGWYGFNPGSFLNIVKAYGESGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRMQTGHWSVSDVCNGLLGGFAAITAGCSVVDPWAAIICGFVAVWVLIGCNLLGEKFHYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYAGSPDRPYGLLLGGGGRLLAAHVVQILAIVAWVSITMGTMFFLLHKLNLLRSSPEEEMEGLDLTSHGGLAYEYHDEVEEQAKRRAFEA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03987 426 PANTHER AMMONIUM TRANSPORTER 28 416 - -
Mepo3g03987 426 Pfam Ammonium Transporter Family 27 409 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mepo3g03987 426 Gene3D Ammonium transporter AmtB like domains 16 424 IPR029020 -
Mepo3g03987 426 SUPERFAMILY Ammonium transporter 25 389 - -
Mepo3g03987 426 NCBIfam ammonium transporter 27 409 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mepo3g03987 426 ProSitePatterns Ammonium transporters signature. 139 164 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mepo3g03987 426 FunFam Ammonium transporter 19 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03987 Mepo-Chr3 49263780 49265269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03987 30 422 Inorganic Solute Cotransporters AT4G28700 74.747 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03987 K03320 - twl:120007420 661.373