Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g03956 | ATGGGGATCGATCTCAAAGCTGGGGGTAAGAGCAAAAACACCAAACGAACAGAACCTAAATCCAATGATATCTACCTCAAGCTACTCGTCAAGCTATATCGCTTCCTTGTTAGGAGGACTGATAGCAATTTCAATGCGGTAATACTCAAGCGCTTGTTCATGAGCAAGGTCAACCGACCTCCGATTTCTCTGTCAAAGTTGATTGAGTACATGAAGGGGAAGGACGGTAAAATTGGTGTTGTTGTGGGGGCTGTAACAGATGATATCAGGGTATATGAAGTCCCAGTGTTAAAAATTGCTGCCCTTAGGTTCACAGAGACGGCACGTGCAAGAATAGAGAAGGCGGGTGGTGAATGCTTAACATTTGATCAACTTGCCCTTAGAGCTCCCCTTGGACAGAACACGGTCCTCCTAAGAGGCCCAAAGAATGCTCGGGAAGCAGTAAAACACTTTGGCCGTGCTCCTGGTGTGCCACACAGCCATTCCAAGCCTTATGTAAGATCAAAGGGAAGGAAGCAAGAGAAGGCCAGAGGAAGGAGGAAGAGTAGAGGATTTAGGGTTTGA | 564 | 0.4681 | MGIDLKAGGKSKNTKRTEPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPISLSKLIEYMKGKDGKIGVVVGAVTDDIRVYEVPVLKIAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSHSKPYVRSKGRKQEKARGRRKSRGFRV | 187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g03956 | 187 | PANTHER | 60S RIBOSOMAL PROTEIN L18 | 1 | 187 | IPR000039 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo3g03956 | 187 | ProSitePatterns | Ribosomal protein L18e signature. | 50 | 67 | IPR021132 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo3g03956 | 187 | SUPERFAMILY | Ribosomal proteins L15p and L18e | 20 | 139 | IPR036227 | - | |
Mepo3g03956 | 187 | MobiDBLite | consensus disorder prediction | 151 | 187 | - | - | |
Mepo3g03956 | 187 | FunFam | 60S ribosomal protein L18 | 1 | 187 | - | - | |
Mepo3g03956 | 187 | Gene3D | - | 1 | 187 | - | - | |
Mepo3g03956 | 187 | Pfam | Ribosomal protein 60S L18 and 50S L18e | 2 | 187 | IPR021131 | - | |
Mepo3g03956 | 187 | MobiDBLite | consensus disorder prediction | 164 | 187 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g03956 | Mepo-Chr3 | 48990348 | 48993715 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g03956 | 3 | 187 | Cytoplasmic Ribosomal Protein Gene Family | AT2G47570 | 75.806 | 7.30e-102 | 290 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g03956 | K02883 | - | gmx:100813255 | 325.094 |