Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03943 ATGTCTGGGGGAGGAGACCCTAAGAGGAATAAGAGAATCGCCATAATTGGCGTCTCTACCTTCTTATTAGTCGCCATGGTTGTCGCCGTCACAGTTAGCGTAGCCTTCAACAACAAAAAGGAACCTGGAGAAGAAACTTCAAAAGAGTCACGCGTATCTCAATCGGTAAAAGCCGTCAAAACACTTTGCGCACCAACAGATTACAAAAAGGAATGTGAGGACAGTCTCATAGCACATGCTGGCAATATAACTGAGCCAAAAGAACTCATCAAGATCGCTTTCAACATAACCATCGCAAAAATCGGTGAAGGACTTAAAAAAACTCATCTCCTTCAAGAGGCTGAAAAAGATGAAAGAACTAAACAAGCACTTGATACGTGTAAACAAGTCATGCAGCTTTCCGTTGAGGAATTCCAAAGGTCACTAGAAAGGTTCAGTAACTTTGACCTTAATAGCCTCGACAGAGTCCTCACGAGTTTGAAAGTATGGTTAAGCGGTGCCATCACATACCAAGAAACATGTTTGGATGCTTTTGAGAATACTACAACCGATGCTGGTAAAAAAATGCAAGAGGTTTTGCAAACTTCTATGCATATGAGTAGCAATGGTCTTTCCATTATTAACCAACTTTCCAAAACATTCGAAGAGATGAAACAACCTGCTGGTCGTCGTCTTTTGAAGGAAAGTGTTGATGGAGAAGAGGATGTTTTAGGTCATGGTGGTGATTTTGAGCTTCCTGAGTGGGTTGATGACCGTGCTGGTGTTAGGAAACTTCTTAATAAAATGACTGGAAGGAAACTTCAGGCTCATGTTGTTGTTGCTAAGGATGGAAGTGGAAATTTCACCACAATCACTGAGGCTCTTAAGCATGTTCCCAAGAAAAACTTGAAGCCATTTGTTATTTACATCAAGGAGGGTGTTTATAAAGAGTATGTTGAAGTTACTAAAACCATGACTCACGTTGTTTTTATCGGTGATGGTGGTAGAAAGACACGCATTACTGGCAATAAAAACTTCATTGATGGAGTTGGTACCTTCAAAACCGCTACCGTTGCTATTACTGGAGATTTCTTTGTTGGCATTGGTATTGGTTTTGAAAACTCTGCTGGACCAGAAAAGCATCAAGCAGTTGCCTTGAGAGTCCAATCTGACAGATCAATTTTCTACAAATGCAGAATGGATGGTTATCAAGACACACTTTACGCTCACACCATGCGTCAATTCTACCGTGATTGTGTTATCTCAGGTACCATTGACTTCGTCTTTGGTGATTCCATTGCTGTTCTCCAAAACTGCACTTTCGTCGTACGAAAGCCATTGGAAAACCAACAATGCATTGTGACTGCACAAGGTAGGAAGGAAAAAAACCAACCATCAGGATTAATCATCCAAGGAGGTTCAATTGTGGCAGATCCAAAATACTATCCAGTTAGACTCAAGAACAAAGCTTACTTGGCTCGTCCATGGAAGAATTTCTCAAGAACTATCTTTTTGGATACATATATTGGTGATTTGATCACACCTGAAGGTTATATGCCATGGCAAACACCAGCAGGTATCACAGGAACTGACACTTGTTACTATGCTGAGTACAATAACCGTGGTCCTGGTTCCGACGTTAAACAGCGTGTAAAATGGCAAGGTGTTAAGACTATTACTTCAGAAGGAGCAGCTGGTTTCGTGCCGATTAGATTCTTCCATGGAGATGATTGGATTAGGGTAACTAGAGTTCCTTATTCTCCAGGAGGGACTAGGACTCCTCCTACAAGACCAACTCATTGA 1782 0.4136 MSGGGDPKRNKRIAIIGVSTFLLVAMVVAVTVSVAFNNKKEPGEETSKESRVSQSVKAVKTLCAPTDYKKECEDSLIAHAGNITEPKELIKIAFNITIAKIGEGLKKTHLLQEAEKDERTKQALDTCKQVMQLSVEEFQRSLERFSNFDLNSLDRVLTSLKVWLSGAITYQETCLDAFENTTTDAGKKMQEVLQTSMHMSSNGLSIINQLSKTFEEMKQPAGRRLLKESVDGEEDVLGHGGDFELPEWVDDRAGVRKLLNKMTGRKLQAHVVVAKDGSGNFTTITEALKHVPKKNLKPFVIYIKEGVYKEYVEVTKTMTHVVFIGDGGRKTRITGNKNFIDGVGTFKTATVAITGDFFVGIGIGFENSAGPEKHQAVALRVQSDRSIFYKCRMDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDSIAVLQNCTFVVRKPLENQQCIVTAQGRKEKNQPSGLIIQGGSIVADPKYYPVRLKNKAYLARPWKNFSRTIFLDTYIGDLITPEGYMPWQTPAGITGTDTCYYAEYNNRGPGSDVKQRVKWQGVKTITSEGAAGFVPIRFFHGDDWIRVTRVPYSPGGTRTPPTRPTH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03943 593 CDD PMEI-like_3 61 212 - -
Mepo3g03943 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Mepo3g03943 593 ProSitePatterns Pectinesterase signature 1. 295 314 IPR018040 -
Mepo3g03943 593 Pfam Pectinesterase 270 569 IPR000070 GO:0030599|GO:0042545
Mepo3g03943 593 SMART PMEI_2 54 206 IPR006501 GO:0004857
Mepo3g03943 593 NCBIfam pectinesterase inhibitor domain 50 210 IPR006501 GO:0004857
Mepo3g03943 593 Gene3D - 264 583 IPR012334 -
Mepo3g03943 593 SUPERFAMILY Pectin lyase-like 268 582 IPR011050 -
Mepo3g03943 593 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Mepo3g03943 593 PANTHER PECTINESTERASE 20 573 - -
Mepo3g03943 593 FunFam Pectinesterase 55 211 - -
Mepo3g03943 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
Mepo3g03943 593 FunFam Pectinesterase 264 583 - -
Mepo3g03943 593 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03943 Mepo-Chr3 48888942 48891726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03943 1 582 Carbohydrate Esterase AT3G05610 49.063 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03943 K01051 - gmx:100801686 891.338