Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03942 ATGGCCTTGCTTGTGAATTTCCTTTTCATTCTCATCCTTTTACCATCATTTGATCAAGTTCTTTCATTCCCAGATGAAATTCCCTCAGATATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCCTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAATGAGCTAACCAGAACAGGCCCTCCAAGTCCAACTTCTGTCATTAATGCTGCACTTAGAACCACAATCAATGAAGCCATAGGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGTGAGCAACTGGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCGGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAACCAAGACACATGTATTGAAGGGTTTGAAGGCACTGATAGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACACAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGCCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGGTGAAAGTTTGGAGTTTCCTGAATGGATGACCGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGGTAAGATTGCAGATGCGGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATATAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGTTTGCTGTATCTGGGAAGGGTTTCATTGCGAAGGACATGACATTCCGGAACACTGCTGGACCGGTAAACCATCAAGCTGTGGCATTGCGTGTCGATTCAGACCAGTCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCACTGAGACAGTTCTACCGTGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGCAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGGTTTACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTCGAGTGGCTTGGTAACTTTGCATTAGACACTTTGTGGTACGGCGAATACAGGAATTATGGACCTGGTTCATCGCTCGCTGGTAGAGTCAAATGGCCTGGTTATCATGTCATTAAAGATGCTTCTGCCGCCGGTTATTTTACGGTTCAGCGGTTCCTTAACGGCGGTTCATGGTTGCCTCGAACAGGTGTTAAGTTCACAGCAGGGCTAAGCAATTGA 1635 0.4398 MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRPPRNTTLHETSTGESLEFPEWMTEADQELLKSKPHGKIADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIAKDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHVIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03942 544 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Mepo3g03942 544 FunFam Pectinesterase 37 196 - -
Mepo3g03942 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 195 IPR035513 -
Mepo3g03942 544 CDD PMEI-like_4 53 195 - -
Mepo3g03942 544 NCBIfam pectinesterase inhibitor domain 4 194 IPR006501 GO:0004857
Mepo3g03942 544 PANTHER PECTINESTERASE 13 532 - -
Mepo3g03942 544 Pfam Pectinesterase 240 527 IPR000070 GO:0030599|GO:0042545
Mepo3g03942 544 SMART PMEI_2 35 190 IPR006501 GO:0004857
Mepo3g03942 544 FunFam Pectinesterase 235 542 - -
Mepo3g03942 544 Gene3D - 237 542 IPR012334 -
Mepo3g03942 544 Pfam Plant invertase/pectin methylesterase inhibitor 39 190 IPR006501 GO:0004857
Mepo3g03942 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 194 IPR035513 -
Mepo3g03942 544 SUPERFAMILY Pectin lyase-like 240 541 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03942 Mepo-Chr3 48886012 48888071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03942 9 544 Carbohydrate Esterase AT3G05620 62.340 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03942 K01051 - gmx:100810565 944.495