Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03935 ATGGGGCATTTATCCTCTATGTTCAATGGGTTGGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGCAATGGCAAAAGAAGCTAAGAAAAATGACTTGATTTTGTGTAGCTCTGGCACTATTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGTCAGAAAGGAACCAATCAAGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGCGGTATATTTGACGGACATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAATCAATGCCAAGGTCTTTGCTATGCAATTGGCAAGAGACACTTGCTGCACAATCATCATCACTTGATGATCATGTAAAGGATATTGATCATGTTAAGACAGCTGCAGACAACAAGCAACAAAGATTCAATATATGGAAGCACTCTTTCTTGAAGACTTGTGCTTCCATTGATCAAGAACTTGAACATTGTCGAAAGTTTGACTCGTTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGGGGAAACGGTATTCATAGCAAATGTTGGTGACTCTCGTGCAGTATTAGCTACAACATCAGACGATGATGGAAGTTTGGTAGCAGTACAATTAACAGTTGATTTCAAGCCAAATTTACCTCAAGAGGAAGAGAGAATAATTCAGTGTCAAGGACGTGTGTTCTGTTTACATGATGAACCAGGAGTGCATAGGGTCTGGTTACCAGATGTAGAGTCTCCTGGACTTGCCATGTCAAGGGCTTTTGGAGATTATTGTATTAAAGATTATGGTCTTATTTCAGTGCCCGAGGTTACTCAGAGGAATATAAGTAGTAAAGACCAGTTTGTTGTGCTTGCCACTGATGGGGTTTGGGATGTGATCTCCAATCAAGAAGCAGTAGACATTGTATCTTCAACACCAGACAAAGCAAAATCAGCTAAACGTTTGGTGGAATGTGCAGTGCATGCATGGAAACGCAAGAGAAGGGGTATTGCCATGGATGATATTTCTGCTATATGTCTCTTTTTGCACTCTCCCATTTCCTCTGAGCAAGATAGCCCAATTGACTCTGTTAAATAG 1134 0.4083 MGHLSSMFNGLARSFSLKKGRNSVRCERREAVEAMAKEAKKNDLILCSSGTINVDGSNNFASVFSKRGQKGTNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSLDDHVKDIDHVKTAADNKQQRFNIWKHSFLKTCASIDQELEHCRKFDSFYSGTTALSIVRQGETVFIANVGDSRAVLATTSDDDGSLVAVQLTVDFKPNLPQEEERIIQCQGRVFCLHDEPGVHRVWLPDVESPGLAMSRAFGDYCIKDYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAVHAWKRKRRGIAMDDISAICLFLHSPISSEQDSPIDSVK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03935 377 SMART PP2C_4 51 359 IPR001932 -
Mepo3g03935 377 SUPERFAMILY PP2C-like 56 362 IPR036457 -
Mepo3g03935 377 Pfam Protein phosphatase 2C 67 335 IPR001932 -
Mepo3g03935 377 PANTHER PROTEIN PHOSPHATASE 41 359 IPR015655 GO:0004722|GO:0006470
Mepo3g03935 377 CDD PP2Cc 59 361 IPR001932 -
Mepo3g03935 377 Gene3D - 47 363 IPR036457 -
Mepo3g03935 377 ProSiteProfiles PPM-type phosphatase domain profile. 60 361 IPR001932 -
Mepo3g03935 377 FunFam Probable protein phosphatase 2C 34 51 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03935 Mepo-Chr3 48830750 48834266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03935 1 362 PP2C-type Phosphatase Gene Family AT3G05640 73.077 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03935 - - gmx:100808955 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03935 3 48830750 48834266 Mepo3g03935 3 48830750 48834266 ECH
Mepo3g03935 3 48830750 48834266 Mepo4g03442 4 43852043 43855439 PCT