Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03926 ATGGGAATCATGGATCAAATGGATAAGGAATGTTGTTCATACGATGAAATGGGTGTGATCAAGAAATTTTGTGCTGATTGCAAAACCACCAAAACACCACTTTGGAGAGGAGGACCCAATGGACCCAAGACGCTTTGCAACGCTTGTGGAATCAGGTACAGAAAGAGAAGAGGTTGTTGTAGCAAAGGACAAGAAAGGGAAAGGAAGAGAGAGAAAGGTGCAGAAAATGGGAATGGGAGGGGTGGTACTAGCAATGATGATTTGAGTGAGTGTTTGAAAATGAAGTTAGTGGCATTGGGTGAAGAGTTTTTGTTGCTGAAGAAACAAAGAAGGATTAAATTAGGTGAAGAGGAACAAGCTGCTGTGTGTTTGATGGCACTCTCTTGTGGCTTTGTTTTTGCTTGA 405 0.4198 MGIMDQMDKECCSYDEMGVIKKFCADCKTTKTPLWRGGPNGPKTLCNACGIRYRKRRGCCSKGQERERKREKGAENGNGRGGTSNDDLSECLKMKLVALGEEFLLLKKQRRIKLGEEEQAAVCLMALSCGFVFA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03926 134 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 58 - -
Mepo3g03926 134 ProSitePatterns GATA-type zinc finger domain. 24 49 IPR000679 GO:0006355|GO:0043565
Mepo3g03926 134 Gene3D - 20 81 IPR013088 GO:0006355|GO:0008270
Mepo3g03926 134 SMART GATA_3 18 69 IPR000679 GO:0006355|GO:0043565
Mepo3g03926 134 MobiDBLite consensus disorder prediction 60 86 - -
Mepo3g03926 134 ProSiteProfiles GATA-type zinc finger domain profile. 24 54 IPR000679 GO:0006355|GO:0043565
Mepo3g03926 134 CDD ZnF_GATA 23 73 IPR000679 GO:0006355|GO:0043565
Mepo3g03926 134 MobiDBLite consensus disorder prediction 60 76 - -
Mepo3g03926 134 Pfam GATA zinc finger 24 57 IPR000679 GO:0006355|GO:0043565
Mepo3g03926 134 PANTHER OS01G0976800 PROTEIN 21 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03926 Mepo-Chr3 48728161 48729246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03926 21 134 C2C2-Gata Transcription Factor Family AT5G49300 53.509 1.05e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo3g03926 GATA 7.9e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03926 - - cam:101512290 224.942