Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03924 ATGGATCAAGAAGGAGGAGGATCCAACGGTGGCAGTAGATCTTCTTGCTATTACTCTGTTCTTGGCATTCGTAGTGATGCCTCCTCCTCTGATATTCGCACTGCTTACCGCAAACTCGCTATGAGATGGCACCCTGATAAATTCGCTCGGAATCCTACAACTGCTGGAGAAGCCAAACGACGGTTTCAGCAAATTCAAGAAGCATACTCAGTTCTATCGGATGAGTCTAAAAGATCAATGTACGATGCTGGACTATACGATCCTCTTGAAGAAGAAGAAGACCAAGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAATAATGTCAAAGATGAGGGGGACAGTTTGGAGGATCTACAAAGGATGTTTGTTGAGATGGTAGGTGGAGATGGTATGAACTTTTCTCTGAACCAAGATCAGACGGCTGGGAAGAGAGGACGCTCGAGTGGATCAAGAGGCAACGCAGCCAAGCGCAGCAATCATTGCCGCTAG 498 0.4538 MDQEGGGSNGGSRSSCYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPTTAGEAKRRFQQIQEAYSVLSDESKRSMYDAGLYDPLEEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMNFSLNQDQTAGKRGRSSGSRGNAAKRSNHCR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03924 165 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Mepo3g03924 165 PRINTS DnaJ domain signature 77 96 IPR001623 -
Mepo3g03924 165 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mepo3g03924 165 PRINTS DnaJ domain signature 57 77 IPR001623 -
Mepo3g03924 165 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mepo3g03924 165 PANTHER PUTATIVE, EXPRESSED-RELATED 9 144 - -
Mepo3g03924 165 SMART dnaj_3 15 77 IPR001623 -
Mepo3g03924 165 MobiDBLite consensus disorder prediction 136 158 - -
Mepo3g03924 165 Gene3D DnaJ domain 7 107 IPR036869 -
Mepo3g03924 165 Pfam DnaJ domain 17 82 IPR001623 -
Mepo3g03924 165 SUPERFAMILY Chaperone J-domain 15 107 IPR036869 -
Mepo3g03924 165 CDD DnaJ 16 74 IPR001623 -
Mepo3g03924 165 ProSiteProfiles dnaJ domain profile. 16 85 IPR001623 -
Mepo3g03924 165 MobiDBLite consensus disorder prediction 136 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03924 Mepo-Chr3 48713071 48714862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03924 7 83 C2H2 Transcription Factor Family AT1G74250 41.026 1.63e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03924 - - mtr:11423150 305.449