Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03922 ATGTCTCTGAGAGCTGATACTTCTTCATCATCTTCTTCGTCTCGGAGGAAGAATGCCTCTACCAGAGTTGAGTCGGAAGATGGTCATCGGAGGAGGAGAGATGGCGGCTTTAAGAATATACTTCCTGGAAAACCATCTTTTTCCAAAAGGCGGAAATTTTTTCGTGAAGATACTTCTTCTCCAATGCCCACTGAGGATCCTCCTTTCCCCGTCTATATCTCAGATGCAGTGCAAACTGTTCTTGCAATGAAACAGGACTTACTGTCGGACGACCCTGCTGCACAACTGGAAGCAACTACTCAGTTTGGAAAGCTACTGTCAGGGGGCTACATCCCTCTAATTGATAAGGTAAAGCAGGCTGGTGTTATCCCGCGGGTTGTGCAGTTTTTGAAAAGGGATGATATGCCCCAACTGCAGTCCATGGCAGCATGGACTCTGATCAATGTCACCGCGGGATTGTCTGAGCATACAAATACTGTGATTGAACATGGTGCTGTTCCTCTGCTTGTGAAGCTTCTGAGCACTGGTAGCGATGACGGCAAAGAACAGGCATTATGGGCATTAGGTAATATTGCTGGTAGTTCTGTGACCGCAAAGGATCTTGTTTTAAATCATGGTTCACTTCCTCCATTATTGTCTCTGTTGTGGAATCCTTCTACAACAATAAAATCTACATGGAGAATTGCTATATGGGCTTTTGTCAACATTATTCCTGGAAAGCTTCCACTAACTCTTGGGGATCAGATTCTGCCAGCATTACCCGGCCTTCGGGAACTCTTATTGATGCCTGATGAACCAGTTTTACTATATGCATGCTGTATTCTCTGCTGGCTTACTCAGGATGGTTCAGACAAAATGGTTCAAGCTATCGTTGAGGGAAATTTTTGCCCGCGACTTGTAGAGTTACTACTGAATCCGGGGTCAGAAGTTGTAGTGCCTGCTCTGCAGGCTCTAGGAGAAATTGCTTCTGGTGCTAATGATGCTCAGACTCAGGTTCTAATTAACAGTGGAGCTCTTCGTTGTCTTAAAGATCTTCTTACACAAAGTGATAAAATCATCCTTGAAGAAGCTTGTTTTGTCATTTTGAATATCGCAGGTGGGAATATTGCTCAAAAACAGGATGTCATTGATGCCGATCTTATTAGTTCTCTTGTCAGTCTCACAAAGGCTGACTTCGACATTAGGAAGAAGGCCGTGTGGGCTATTGCTAATGTCACTGAGGGAACTCATGAGCATATTCGGTACTTGGCGTGTAATGGGTGCATCGAGGCACTCAGTGATCAATTGAGCAGCACAGACGCGTCTATGCTGGGACTTTGTCTGACTGGGCTGAAAAACATTTTAAAGGCAGGAGAAATTAACAAGGATAAGGGGGTGAATGTTTATGCTAAAATGATTGAAGAGTGTGCAGGATTGGATAAGATTGAAAGATTATTGCTAAGCTATGACAACAATCTCATTAATAAAATAGTGGTGTACATTTTGGACACATATTTTCCTGAGGACCTTGAAACCGTAGATGACTAG 1527 0.4361 MSLRADTSSSSSSSRRKNASTRVESEDGHRRRRDGGFKNILPGKPSFSKRRKFFREDTSSPMPTEDPPFPVYISDAVQTVLAMKQDLLSDDPAAQLEATTQFGKLLSGGYIPLIDKVKQAGVIPRVVQFLKRDDMPQLQSMAAWTLINVTAGLSEHTNTVIEHGAVPLLVKLLSTGSDDGKEQALWALGNIAGSSVTAKDLVLNHGSLPPLLSLLWNPSTTIKSTWRIAIWAFVNIIPGKLPLTLGDQILPALPGLRELLLMPDEPVLLYACCILCWLTQDGSDKMVQAIVEGNFCPRLVELLLNPGSEVVVPALQALGEIASGANDAQTQVLINSGALRCLKDLLTQSDKIILEEACFVILNIAGGNIAQKQDVIDADLISSLVSLTKADFDIRKKAVWAIANVTEGTHEHIRYLACNGCIEALSDQLSSTDASMLGLCLTGLKNILKAGEINKDKGVNVYAKMIEECAGLDKIERLLLSYDNNLINKIVVYILDTYFPEDLETVDD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03922 508 MobiDBLite consensus disorder prediction 1 69 - -
Mepo3g03922 508 SUPERFAMILY ARM repeat 72 502 IPR016024 -
Mepo3g03922 508 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 206 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 110 151 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 326 366 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 153 193 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 195 238 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 283 323 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 409 449 IPR000225 GO:0005515
Mepo3g03922 508 SMART arm_5 368 407 IPR000225 GO:0005515
Mepo3g03922 508 MobiDBLite consensus disorder prediction 19 38 - -
Mepo3g03922 508 Gene3D - 74 499 IPR011989 -
Mepo3g03922 508 PIRSF Importin_alpha 5 508 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mepo3g03922 508 PANTHER IMPORTIN ALPHA 26 501 - -
Mepo3g03922 508 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g03922 508 Pfam Atypical Arm repeat 460 504 IPR032413 -
Mepo3g03922 508 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 121 164 IPR000225 GO:0005515
Mepo3g03922 508 Pfam Armadillo/beta-catenin-like repeat 113 146 IPR000225 GO:0005515
Mepo3g03922 508 Pfam Armadillo/beta-catenin-like repeat 154 192 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03922 Mepo-Chr3 48693430 48697219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03922 120 289 U-box Gene Family AT3G46510 30.409 2.55e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03922 K15042 - fve:101301791 392.504