Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03921 ATGTCTCTCCGACCTGATACTTGGCCATCCTGGTCATCTCAAAGGAAGAAAGAGCATAAGAGTGCTATCAGAGTTGAGGTGGAATGCGGTGGTCGGAGGAGGAAAGAGGACGGTGTTTTTTTGATACGTAAGAATAAACGCCCCGATTCTCTCTCCAAGAGGCGAAAGTTTTTTCGAGAACAAACTTTTTCTCCAATGCTCAATGAGGATCCTCCTTTTCCCGTCTATGTCTCAGATGCAGAATATGATGTTATAATGGCCAAGGTGCAAACCATTCCTGCAATGACACTGGCATTATTGTCTGACGACTCTGCTGCACAACTTGAAGCAACTACTCAGTTTGGAAAGCTACTATCAGGGGGCTACATCCCGCTAATTGATAAGGTGAAGCGGGCTGGTGTTGTCCCGCGGTTTGTGCAGTTTTTGACAAGGGATGATATGCCCCAACTGCAGTCCATGGCAGCATGGACTCTGATCAATGTTACTGCGGGATTGTCTGAGCATACAAATACTGTGATTGAACATGGTGCTGTTCCTCTGCTTGTGAAGCTTCTGAGCTCTGGTAGTGATGACGGCAAAGAACAGGCATTATGGGCATTAGGTAATATTGCTGGCAATTCCCTTACCGCAAGGGACCTTGTTTTAAATCATGGTGCACTTTCTCCACTATTGTCTTTGATGTGGAATCCTTCTTCAACAAAAAAATCTACATGGAATATTGCTACATGGGCTTTTTTCAACTTCACTCGCGGAAAGCCTCTTCTAACTCTTCAGGATCAGATGCTACCAGCATTGTCTGGCCTCCGGGAACTCTTATTGATGCCTGATGAAGAAGTTATACTATATGCATGCCATCTCCTCTCCTGGTTTACTCAGAAAGGTTCAGACAAAATGGTTCAAGCTATCGTTGAGGCAAAATTTTGCCCACGACTTGTAGAGTTACTACTGTATCCGGAGTCAAAAGTTGTTGCGCCTGCTCTGGAGATTCTAGGAGATATTGCTTCTGGTGATGATGCTCAGACTCAGTTTCTAATTAACAGTGGAGCTCTCCTTTGTCTTAAAGCTCTTCTTACACAAAGTGATAAAATCATCCTTGAAGAAGCGTGTTCGGTAATTGCAAATATCGCAGGTGGGAATAATGCACAAAAACAGGATGTCATTGACGCCGATCTTATTAGTTCTCTTGTCCGTCTCACAAAGGCCGACTTCGACATTAGGAAGGAGGCTGTGTGGGTTATTTCTAATGTCACTCACGGAACTCTTGAGCATATTCGGTACTTGGCATGTAATGGTTGCGTCGAGGCACTCTGTGATCAATTGACCGGCACAGACGCGACTATGCTGACACTTTGTCTGACTGGGCTGAAAAACATTTTAAAGGCAGGAGAAATTAACAAGGACAAGGGATTATATAAGGGGGTGAATGTTTATGCTCAAATGATTGAAGAGTGTGCAGGATTGGATAAGATTGCAAGATTGCAAAGCTATGACAACAATAACATTTATAAAAAGGCTCTGGAGATTTTGGAGAAATATTTTCCTGAGGACCTTGAAGTTGTTGATGAAGAGAATCTTCCATAG 1581 0.4352 MSLRPDTWPSWSSQRKKEHKSAIRVEVECGGRRRKEDGVFLIRKNKRPDSLSKRRKFFREQTFSPMLNEDPPFPVYVSDAEYDVIMAKVQTIPAMTLALLSDDSAAQLEATTQFGKLLSGGYIPLIDKVKRAGVVPRFVQFLTRDDMPQLQSMAAWTLINVTAGLSEHTNTVIEHGAVPLLVKLLSSGSDDGKEQALWALGNIAGNSLTARDLVLNHGALSPLLSLMWNPSSTKKSTWNIATWAFFNFTRGKPLLTLQDQMLPALSGLRELLLMPDEEVILYACHLLSWFTQKGSDKMVQAIVEAKFCPRLVELLLYPESKVVAPALEILGDIASGDDAQTQFLINSGALLCLKALLTQSDKIILEEACSVIANIAGGNNAQKQDVIDADLISSLVRLTKADFDIRKEAVWVISNVTHGTLEHIRYLACNGCVEALCDQLTGTDATMLTLCLTGLKNILKAGEINKDKGLYKGVNVYAQMIEECAGLDKIARLQSYDNNNIYKKALEILEKYFPEDLEVVDEENLP 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03921 526 PANTHER IMPORTIN ALPHA 16 515 - -
Mepo3g03921 526 SUPERFAMILY ARM repeat 19 516 IPR016024 -
Mepo3g03921 526 Gene3D - 90 513 IPR011989 -
Mepo3g03921 526 Pfam Atypical Arm repeat 475 524 IPR032413 -
Mepo3g03921 526 PIRSF Importin_alpha 8 525 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mepo3g03921 526 MobiDBLite consensus disorder prediction 1 23 - -
Mepo3g03921 526 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 176 218 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 165 205 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 379 418 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 420 460 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 122 163 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 337 377 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 206 250 IPR000225 GO:0005515
Mepo3g03921 526 SMART arm_5 295 335 IPR000225 GO:0005515
Mepo3g03921 526 Pfam Importin beta binding domain 15 112 IPR002652 GO:0006606|GO:0061608
Mepo3g03921 526 Pfam Armadillo/beta-catenin-like repeat 379 417 IPR000225 GO:0005515
Mepo3g03921 526 Pfam Armadillo/beta-catenin-like repeat 166 204 IPR000225 GO:0005515
Mepo3g03921 526 Pfam Armadillo/beta-catenin-like repeat 125 158 IPR000225 GO:0005515
Mepo3g03921 526 Pfam Armadillo/beta-catenin-like repeat 337 376 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03921 Mepo-Chr3 48684313 48688050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03921 K15042 - mnt:21389062 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03921 3 48684313 48688050 Mepo4g03451 4 43917701 43922947 ECH
Mepo4g03451 4 43917701 43922947 Mepo3g03921 3 48684313 48688050 ECH
Mepo6g01412 6 15352260 15356284 Mepo3g03921 3 48684313 48688050 ECH
Mepo3g03921 3 48684313 48688050 Mepo3g03921 3 48684313 48688050 ECH
Mepo3g03921 3 48684313 48688050 Mepo4g03451 4 43917701 43922947 PCT