Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03913 ATGTCTAACTCCACCAGCAACAGTGCCTCTGGGGTTGATAACACATTCAGACGAAAATTCGATCGTGAAGAATATCTTGAACGTGCTCGTGAGCGTGAGAGACAGGAAGAAGAGAAAGCAAAACCTAAAGGTAGAGGTCCTCCAGTGCAGAGGAAGCCATTGAAACATAGAGATTATGAAGTAGACCTTGAATCCCGCTTGGGAAAAACTCAGGTTGTAACGCCGGTTGCACCACTAAGCCAACAGGCTGGATATTACTGCTCAGTTTGTGAGTGCGTGGTGAAGGACTCTGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAGAGAGCGTTGGGCATGTCTATGCGAGCTGAACGTTCTTCTCTCAAACAGGTTCAGGAACGGTTTGAAAATCTGAAGAAACGGAAAGACCTAGGAAGCTTTACAGAGCAAGATTTTGATGAAAGGATATTAAAACAGCAACAAGAGGAGGAAGAAAGAAAGCGACTGCGTCGGGAAAAGAAAAAAGAAAAGAAGAAGGAAGCAGTAGAAGAACCTGAAATGGATCCTGACGTTGCTGCCTTGATGGGGTTTGGAGGTTTTCGGTCGTCCAACAAAAAGTGA 609 0.4433 MSNSTSNSASGVDNTFRRKFDREEYLERARERERQEEEKAKPKGRGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRAERSSLKQVQERFENLKKRKDLGSFTEQDFDERILKQQQEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALMGFGGFRSSNKK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03913 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 9 202 IPR040107 GO:0000398|GO:0005681
Mepo3g03913 202 Coils Coil 117 137 - -
Mepo3g03913 202 MobiDBLite consensus disorder prediction 146 182 - -
Mepo3g03913 202 MobiDBLite consensus disorder prediction 1 59 - -
Mepo3g03913 202 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Mepo3g03913 202 MobiDBLite consensus disorder prediction 15 59 - -
Mepo3g03913 202 SUPERFAMILY beta-beta-alpha zinc fingers 80 124 IPR036236 -
Mepo3g03913 202 Gene3D Classic Zinc Finger 79 118 - -
Mepo3g03913 202 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Mepo3g03913 202 Coils Coil 153 180 - -
Mepo3g03913 202 MobiDBLite consensus disorder prediction 146 202 - -
Mepo3g03913 202 Pfam Zinc-finger of C2H2 type 85 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03913 4 147 C2H2 Transcription Factor Family AT3G05760 78.472 5.15e-84 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g03913 zf-C2H2_jaz 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03913 K12848 - gmx:100795833 294.664