Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03906 ATGCCTTCAGCTGCAACATTCGACCTAGGCGCCGTTCCCTTCAACCCTGACGGATGGGGCCCACTCGAATCCACCGCCGATAACACCAACGTTCCCTTCGCTCCTTTCTCCCGTTCCGACAAACTCGGCCGTATCGCCGATTGGACTCGGAATTTCAACAACAACAACAACCCTAACCGATCTAAAAACCCTGCCGATACCGCCTTCGATTTCACCTCCGACCCTTCCTTCCCTAACTTCGCCGAAGACGACTCCTCTTTCCGTCTCGTTGACGGTAAACCCCCTCCCCGTCCCAAATTCGGCCCTAAATGGCGTTTCCAACGCCAGCTTCAGCTTCCTCAACGTCGCGACGAAGAAGTCGAAGCCAAGAAACGTGAAGCTGAGAAAGAAAGAGCTCGTCGTGATCGTCATTACCAGAGCCGCTCAAACCCTAGCAATCACCGCCGTGAGCTTTTCAAATCTTCGGTTGATATTCAACCCGAATGGAACATGCATGATCAGATCCCGTTTTCAACTTTCTCCAAACTGTCATTCACTGTCTCAGAGCCTGAAGATCTTCTCCTCTGTGGTGCTCTTGAAACCTATGATCGTTCCTACGATCGAATTGCACCCAAGAATGAACGTCGTCTTGAGAGGTTTAAGAATAGGAATTTCTTCAAAGTTACCACCACTGATGACCCTGTTATTCGTAGGCTTGCGAATGAGGATAAAGCTACGGTTTTTGCTACTGATGCGATTTTATCTACGTTGATGTGTGCTTCTAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGCGTGATGGGTCTCAATTGGATTTGCTTTCTGTTCATGAGACTTCTCAGGAGCCATTGCCTGAGGCTAAAGATGATATTAATTCCGCTCATTCGCTTAGCGTGGAGGCTTCGTATATCAATCAGAATTTCTCACAGCAGGTTTTGATTAGAGATGGGAAAAAAGTTACTTTTGATGAGCCTAATCCTTTTGCTAATGAAGGGGAAGAGGTTGCTTCTGTTGGTTATAGGTATAGGAGGTGGAAGCTTGCTGATGATATGTATCTTGTTGCTAGGTGTGAGGTTCATAGTGTTGTTGATGTTAACAACCAGAGGTCGTTCCTTACTTTGAATGCGTTGAATGAGTTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGGGGTGCTGTGTTGGCTACTGAGCTTAAGAATAATGCTAATAAGTTGGCTAAGTGGACTGCTCAAGCTCTTTTGGCTAGTGCTGATATGATGAAGTTGGGATATGTGTCTCGTATTCATCCTCGTGATCATTTTAACCATGTGATCTTGGCTGTGGTTGGATATAAACCTAAGGACTTTGCTGCACAAATTAATTTGAATCCAACCAATATGTGGGGGATTGTGAAGTCTATTGTGGACTTGTGCATGAAGTTGAATGAGGGGAAATATGTTCTTGTGAAGGATCCATCTAAGCCACAGGTTAGGATTTACGAGGTTCCAGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCAATACCAGAGGAGGAGCAAGTTCAACCACATGCAGATGGTGCAGAGGAGGCTGTTGATGGTGCAGAGGAAGTTGCTACTGCTACTGCTACCAATGATGTGGAAGATAAGAAGACTGATGGTCAAGCTTAA 1704 0.4566 MPSAATFDLGAVPFNPDGWGPLESTADNTNVPFAPFSRSDKLGRIADWTRNFNNNNNPNRSKNPADTAFDFTSDPSFPNFAEDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKREAEKERARRDRHYQSRSNPSNHRRELFKSSVDIQPEWNMHDQIPFSTFSKLSFTVSEPEDLLLCGALETYDRSYDRIAPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCASRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKVTFDEPNPFANEGEEVASVGYRYRRWKLADDMYLVARCEVHSVVDVNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPKDFAAQINLNPTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPIPEEEQVQPHADGAEEAVDGAEEVATATATNDVEDKKTDGQA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03906 567 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 5 523 IPR007783 GO:0003743|GO:0005737|GO:0005852
Mepo3g03906 567 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 8 511 IPR007783 GO:0003743|GO:0005737|GO:0005852
Mepo3g03906 567 Coils Coil 115 135 - -
Mepo3g03906 567 MobiDBLite consensus disorder prediction 528 542 - -
Mepo3g03906 567 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 5 534 IPR007783 GO:0003743|GO:0005737|GO:0005852
Mepo3g03906 567 MobiDBLite consensus disorder prediction 51 151 - -
Mepo3g03906 567 MobiDBLite consensus disorder prediction 51 80 - -
Mepo3g03906 567 MobiDBLite consensus disorder prediction 110 151 - -
Mepo3g03906 567 PIRSF Transl_init_eIF3d 3 541 IPR007783 GO:0003743|GO:0005737|GO:0005852
Mepo3g03906 567 MobiDBLite consensus disorder prediction 522 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03906 Mepo-Chr3 48562942 48567041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03906 6 564 Eukaryotic Initiation Factors Gene Family AT4G20980 75.382 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03906 K03251 - gmx:100799613 919.842