Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03888 ATGGGTTCTAATCTGAATGCTGAATTATCAAAGAAAACTTCTTTTTTTGGTATAAAGGTTTGGGAAATTATTGCAATTGTAGTTGGTTTGTCAATTATAGTTATTCTCACTGTGTTATCAATTTGCCTTACTTCAAGGAAGAAATCTAGAAAAGCTAGAAACGAGATTCCTGTTACTGAGATACCAAATGTGTCAAAAGAAATCAAAGAAGTGAGGGTTGAACAAGTATCAACAAATGGATTTGCGCCTCGTGATGGAATACTTTTAACCATTCATGATAAATCTAGTGACAAGGAATCAGACAAAGTTATGGTTCATTTAGGTTTAGGGAAGAAGGTGAAGAATGGTGATAGTAGTAGTCATTCAGATTCATTTCATCAATACATGGAGAGAGATGGGGGTGGAGGGTCACATTCGCAATCAGGTGAAGAAGGTAGTTCGGGAACGGTTACTGTGTACAAACACTCTTCGGCTTCATACCCTATAACAGCTCCTTCGCCTTTATCTGGCCTTCCGGAATTCTCTCACTTAGGTTGGGGTCATTGGTTTACTTTGAGGGATCTTGAACTTGCTACAAACCGGTTTGCGAAAGAAAATGTACTTGGTGAAGGTGGTTATGGAGTTGTTTATAAGGGACAGTTGATCAACGGAAGTCCAGTTGCAGTTAAAAAGATACTCAATAATATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGTCATGTCAGACACAAAAACTTGGTTCGACTTTTGGGGTTCTGCGTCGAGGGAACTCACAGGATTCTAGTCTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCCATGCGTCACCATGGCTATCTTACGTGGGAAGCACGCATCAAGATTCTCCTTGGCACAGCCAAAGCGCTTGCGTATTTGCACGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGACGATGATTTCAATGCTAAGGTTTCTGATTTTGGTCTGGCCAAATTACTGGGTGCTGGGAAGAGTCATGTCACAACTCGAGTTATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAACACTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATCACTGGAAGAGATCCAGTTGATTATGGTCGTCCGGCAAATGAAGTGAATCTAGTTGATTGGCTGAAAATGATGGTTGGAAATAGGAGATCAGAAGAAGTGGTTGACCCAAACATTGAGGTGAAGCCATCAACCAGAGCTTTGAAAAGGGCTCTCTTAACTGCTTTAAGATGTGTGGATCCAGATTCTGAGAAAAGACCCAAGATGAGCCAGGTTGTACGTATGCTGGAGTCGGAGGAATACCCTTTAGCAAGAGAGGATCGAAGGCACAGGAGAAGAAATCAAGGGGGTAGTGCAGAAATTGACTCCCAGAGGGAATTTTCGGACACAGACAGGAGTGAGATTCAGAGTTCTAGAGAAGAGAGCAGAGGGTAA 1545 0.4162 MGSNLNAELSKKTSFFGIKVWEIIAIVVGLSIIVILTVLSICLTSRKKSRKARNEIPVTEIPNVSKEIKEVRVEQVSTNGFAPRDGILLTIHDKSSDKESDKVMVHLGLGKKVKNGDSSSHSDSFHQYMERDGGGGSHSQSGEEGSSGTVTVYKHSSASYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKENVLGEGGYGVVYKGQLINGSPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPLAREDRRHRRRNQGGSAEIDSQREFSDTDRSEIQSSREESRG 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03888 514 MobiDBLite consensus disorder prediction 114 150 - -
Mepo3g03888 514 Gene3D Transferase(Phosphotransferase) domain 1 271 483 - -
Mepo3g03888 514 ProSiteProfiles Protein kinase domain profile. 195 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03888 514 FunFam Putative receptor-like serine/threonine-protein kinase 271 482 - -
Mepo3g03888 514 FunFam Putative receptor-like protein kinase 177 270 - -
Mepo3g03888 514 ProSitePatterns Protein kinases ATP-binding region signature. 201 224 IPR017441 GO:0005524
Mepo3g03888 514 PANTHER OS01G0323000 PROTEIN 4 494 - -
Mepo3g03888 514 SUPERFAMILY Protein kinase-like (PK-like) 179 472 IPR011009 -
Mepo3g03888 514 CDD STKc_IRAK 201 467 - -
Mepo3g03888 514 SMART serkin_6 195 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03888 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Mepo3g03888 514 Gene3D Phosphorylase Kinase; domain 1 177 270 - -
Mepo3g03888 514 MobiDBLite consensus disorder prediction 467 514 - -
Mepo3g03888 514 Pfam Protein kinase domain 196 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03888 Mepo-Chr3 48366923 48371858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03888 133 469 Trihelix Transcription Factor Family AT1G70460 46.784 4.47e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mepo3g03888 Pkinase 7.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03888 - - gmx:100787014 857.44