Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03882 ATGAAATATTCGGGTCTTGGAAACGTTCATAATGAAACGGATGATGATTCAAAAGAGGATGATGAATGGGTCTCAAACATAGTAATCATGGGTGTCTCAATGTTGCTTCTTGCATTGGTAACCATTGCTGTTGTTGCCAACGTAGGTGACTCCAAAAACGTAGCAGCTATGAAGAACCTTAACTCTGTCTGTGCAAAAACAGAAGCACCAGAATCTTGTCTCCGTGTCTTAAAACGCGTAGGTGAAACCGCAACGGCTGTGGATTATGCAAAAGCTGCTCTTAATGCAACCCTTAAAGAATTATTATTAGTTAACATACCAAAACCTTACCTTGAAAAAATCCTAACTCCTCAGCAGGCACAATCATATAGAGATTGTTTGGAATTGTTGAATATGGGAAAAGATGAACTAGAATCTTTGTATAAGCTGGCAAATTCGTCTATTGAAGATATATTCCAAATATATCCAAATGATGTTATGAGTAGCCTAAGTGCTATCATTTCATATCAACAAACTTGTGTAAATGAATTGGTGGGAACAAATAGTTACGAGGTTTTGGGGTATTCTTTGAAAATACCAATTCTTCTAACAAGGATTACATTAGCCATTGTCTATAATTTTGTGGAGAGGCCGAAAATCGAAGTTCAACAACTTGATGGGTTTCAAAGATTGAACCTGAGAGCTGCGCACAAACTTATTGAGGTTCAACATACAAGAATAGTTGTGGCTCAAGATGGAAGTGGCCAATTCTCAACCATAACTGAGTCACTAAATTATTGTGCAAAGAATAGAAATAATTCATGTGTTATTTATGTGACGAAAGGTAAATATGAGGAAAAAGTGGTGGTACCTAAGAATTTAGACCAAGTTCTCATGTATGGTGATGGCCCTATGAATACCATTGTCACTGGAATCAAATCAATAGACCCCAAGATTACAACCCCCTTTCGGTCAGCTACTTTTGTTGTAAAGGGCAAAAGATTCATCTGCAAAGATATGGGTTTCATAGCTCCAGCTAGTGTACCAGGAGCATCAGCACTCCTTGTACTTTCTGATCATGCAGCATTCTTCAACTGCAAAATTGACGGTGGAGAAGGAAGCTTATACGCAGTCGCGCATCGCCAATTCTACAGAGACTGCGAAATTCATGGCAGTGTAGACATCATCAAAGGAGACTCAGCAACTATAATTCAAAACTCGCATATAATTGTGAAGCATCGAAATTCTTCTAGCTTAGCTCTAAGAAAAAATGTGGTGAGTGTTCAATCAAGATTAGACAAATATGAGAAAACTGGACTTGTGATCCAAAACTGCACCATCATAGCAGAACAAGGCAAAATCAGTGATAAAAGTCTTGTTGGTTCGACATGTTTGGGAACTCCGCGTAACCAATATTCAAGAACAATCATAATGGAATCATTTCTTGGTGATGTTATACGTCCAAAAGGTTGGTGTAAATTTAGTGATAATTATGGAATTGATACAGCAACGTTTAGAGAGTATAATAACAGAGGCCCTGGTGCAAGAAAAGATATGAGGGTTCATTGGGAGAGTTATAGAACAATTTCTCAGAATTGGAAAAGTGAAATGATGAGTTTTACAGCTGCTGAGTTTATTCAAGCAAACCAATGGTTGACAAATACAGGCATTCCATATGAATCTGGTTTTTTCTTTCATAAATAG 1683 0.3755 MKYSGLGNVHNETDDDSKEDDEWVSNIVIMGVSMLLLALVTIAVVANVGDSKNVAAMKNLNSVCAKTEAPESCLRVLKRVGETATAVDYAKAALNATLKELLLVNIPKPYLEKILTPQQAQSYRDCLELLNMGKDELESLYKLANSSIEDIFQIYPNDVMSSLSAIISYQQTCVNELVGTNSYEVLGYSLKIPILLTRITLAIVYNFVERPKIEVQQLDGFQRLNLRAAHKLIEVQHTRIVVAQDGSGQFSTITESLNYCAKNRNNSCVIYVTKGKYEEKVVVPKNLDQVLMYGDGPMNTIVTGIKSIDPKITTPFRSATFVVKGKRFICKDMGFIAPASVPGASALLVLSDHAAFFNCKIDGGEGSLYAVAHRQFYRDCEIHGSVDIIKGDSATIIQNSHIIVKHRNSSSLALRKNVVSVQSRLDKYEKTGLVIQNCTIIAEQGKISDKSLVGSTCLGTPRNQYSRTIIMESFLGDVIRPKGWCKFSDNYGIDTATFREYNNRGPGARKDMRVHWESYRTISQNWKSEMMSFTAAEFIQANQWLTNTGIPYESGFFFHK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03882 560 SUPERFAMILY Pectin lyase-like 237 554 IPR011050 -
Mepo3g03882 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 207 IPR035513 -
Mepo3g03882 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 207 IPR035513 -
Mepo3g03882 560 PANTHER PECTINESTERASE 35 546 - -
Mepo3g03882 560 SMART PMEI_2 55 203 IPR006501 GO:0004857
Mepo3g03882 560 Gene3D - 237 558 IPR012334 -
Mepo3g03882 560 Pfam Pectinesterase 240 542 IPR000070 GO:0030599|GO:0042545
Mepo3g03882 560 CDD PMEI-like_3 62 207 - -
Mepo3g03882 560 Pfam Plant invertase/pectin methylesterase inhibitor 60 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03882 Mepo-Chr3 48319025 48321267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03882 14 557 Carbohydrate Esterase AT3G05610 34.087 6.36e-91 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03882 K01051 - gmx:102665007 657.907