Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03875 ATGGGAACAGCTACATGCATCGATATCATTCTTGCCATCATCCTCCCACCTCTTGGTGTCTTCCTCAAGTTTGGCTGCAAGGTGGAGTTCTGGATATGTTTGATTCTCACCATCTTGGGCTATCTTCCTGGAATTCTCTATGCTATCTATGTTATCACTAAGTGA 165 0.4364 MGTATCIDIILAIILPPLGVFLKFGCKVEFWICLILTILGYLPGILYAIYVITK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03875 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Mepo3g03875 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 54 IPR000612 GO:0016020
Mepo3g03875 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03875 Mepo-Chr3 48264235 48265553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03875 1 54 RCI2 Gene Family AT3G05890 85.185 3.51e-28 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03875 - - aof:109836707 95.9005