Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03872 ATGGCTAAACTTTTCTGGGTTTTCATTGCAATAGGACTTGTTATCACCAACTTGGTTTATGGGTTTGAATTAGGATATGGTCAACAGCATCACTTCTTCAACGAAACTGAAGAACTCTTTCTGTTAGAGGCTCATGAACATGCATCATCCTTTCTTGAGGGTAATGGATATCCTTTGCTCGTAGGACTCACCCTTATCCATAATGCAGCTGCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTACCATTTGCATCGCGGATATGGATCAGGAACAAACAGTTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAACAATGTCAGAACATGTGTTTATCGCAAGAAAACACGCCGTGGATCATCATTATACATGGAAAAGGAGATACCATTCACAGGAATACTTAGTAATAAACCTCAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGGCTCATTTACTGGAGATGGTGAAGATCAGGAAGCAGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCATTTTGCTAATCAGGCTCTTCTTTCCGGATGTTCCGCGGGTGGCCTAGCTACTATTATACACTGCGATGAATTTCGAGGTCTCTTTCCAAGGAATACTAAAGTGAAGTGTCTTAGCGATGCAGGGTTGTTTCTTGATTCGATTGACATATCTGGTGAACGCACCCTCCGGAATATGTACAACGGTGTTGTAGGGATGCAGGAAGCACAGAAGAATCTACCGCAGATTTGTACTAATCACCTTGATCCTACATCGTGTTTCTTCCCTCAGAATTTGATTGCCAGTGTTAGAACACCACTTTTTCTTCTCAATACTGCTTATGATTCATGGCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCCCATGGCTATTGGCATGAATGCAGATTAAACCATGCTAAATGCACAAGGCCACAAATCCAATTTCTGCAAGGGTTCAGGACTCACATGTTGAATTCTATTAAAGACTTCTCAAGATCAAACAAGAATGGATTGTTTATCAATTCATGTTTCGCTCACTGCCAAACCGAGAGGCAAGATACATGGTTTTCAGACAATTCTCCGGTTATTAGGAACAAGGCAATTGCTTTGGCTGTTGGAGACTGGTATTTTGACAGAGAAGGTGTTAAGGTCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATTTGGTTTTCAGTTGA 1275 0.4141 MAKLFWVFIAIGLVITNLVYGFELGYGQQHHFFNETEELFLLEAHEHASSFLEGNGYPLLVGLTLIHNAAAKGAVCLDGTLPGYHLHRGYGSGTNSWLVNLEGGGWCNNVRTCVYRKKTRRGSSLYMEKEIPFTGILSNKPQENPDFFNWNRVKLRYCDGGSFTGDGEDQEAELQFRGQRIWAAAMEDLMSKGMHFANQALLSGCSAGGLATIIHCDEFRGLFPRNTKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGMQEAQKNLPQICTNHLDPTSCFFPQNLIASVRTPLFLLNTAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTRPQIQFLQGFRTHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIRNKAIALAVGDWYFDREGVKVIDCPYPCDNTCHHLVFS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03872 424 PANTHER NOTUM-RELATED 59 420 IPR004963 GO:0016787
Mepo3g03872 424 Pfam Pectinacetylesterase 60 403 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03872 Mepo-Chr3 48204198 48207979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03872 1 423 Carbohydrate Esterase AT1G57590 65.962 0.0 591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03872 3 48204198 48207979 Mepo4g03547 4 44885834 44889935 ECH
Mepo3g03872 3 48204198 48207979 Mepo3g03872 3 48204198 48207979 ECH
Mepo4g03547 4 44885834 44889935 Mepo3g03872 3 48204198 48207979 ECH
Mepo1g00587 1 5577970 5582799 Mepo3g03872 3 48204198 48207979 ECH
Mepo3g03872 3 48204198 48207979 Mepo4g03516 4 44638451 44642383 PCT