Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g03867 | ATGGCTTCCATAACCGCAATCGGTGCTTCCACCGCATGCAAACTTCCCTCTCTCGAACTCTACAAAAAACACAAACTAACTTCCATTTCGACTTCCTCCGTTAAATTTCACTTTTCCGACGGTAACAAATCCCGCCACATCAACCGTCTCGCCAATTTCAACTCCTCCGATAGGTTTCTTCCTTCAGCCGTCGCTACTCCTAATTCCTCCTCTTCTTCGCTTCTCAGTGATGAAGCATTCAAAGGATTAGGCTCTGGCTTCGACGGAGAATCTGAAGACGAAGATTTTCCTTCACGAACTACTTCTATTAACGCTGATGAACTTGACATTTCTAAACTCGATTTGCCTTCGCAGCTTGTTGATTCGCTACGTGACCGTGGGATTACTCAACTTTTTCCTATTCAGAGAGCTGTGTTAGTACCTGCACTAGAAGGCAGAGATATTATTGCTCGTGCAAAGACTGGAACAGGGAAAACATTGGCTTTTGGAATTCCTATTATCAATGGTTTAGACGATGGTCAAGATTCTGGTCCTTACAGTCGCAGGCGTCTTCCTAGAGCTTTGGTACTTGCACCTACCAGGGAGTTAGCAAAGCAAGTGGAGAAGGAGATAAAAGAATCTGCACCTTATCTCAAAACTGTTTGTATATATGGAGGCGTTTCTTATGTTACTCAACAGAGTGCACTTTCGCGTGGTGTTGATGTGGTTGTTGGAACGCCTGGTAGGCTGATTGACCTCATCAATGGGAACACACTTAAGTTGAGTGAAGTTGAGTATTTGGTACTCGACGAAGCTGATCAGATGCTTGCTGTTGGGTTTGAAGAGGATGTAGAAGTCATTTTGGAAAAGCTTCCAGCAAAGAGACAGAGCATGCTTTTTTCTGCAACCATGCCTAGTTGGGTGAAGAAATTGGCCAGGAAATACTTGAACAATCCATTGACAATTGATTTGGTTGGTGATGAAGAAGAAAAGCTTGCTGAAGGGATAAAACTATATGCTATATCGGCCACTTCCACTTCAAAGCGAACCATTCTTTCTGATCTTATTACCGTTTATGCAAAGGGTGGGAAGACTATAGTTTTTACGCAGACAAAAAGAGATGCTGATGAAGTATCATTGGCATTAACAAATAGTATCACTTCTGAAGCACTGCATGGTGATATATCTCAGCACCAGAGAGAAAGAACATTGAACGGTTTCAGACAAGGAAAATTTACAGTGCTTGTTGCAACTGATGTTGCATCTCGTGGACTTGATATTCCCAATGTTGATTTGATTATCCATTATGAGCTTCCCAATGATCCCGAGACTTTTGTACATCGCTCTGGCCGTACTGGCCGTGCAGGAAAACTAGGTACTGCCATTCTGATGTTCACAGGTAGCCAGAGGAGAACAGTTAGATCCCTTGAGCGTGATGTAGGTTGTAAATTTGAATTTGTTAACGCGCCGTCTGTGGAAGATGTTTTGGAGTCATCTGCGGAGCAAGTTGTTGTCACACTTAATGGAGTTCATCCAGAGTCTATTGCATTTTTCATCCCAACTGCACAGAAACTGATTGAAGAAAAAGGAACAACTGCCCTTGCAGCTGCACTGGCACAGATGAGTGGATTCTCCCAACCTCCGTCTTCCCGGTCTCTTATCACCCATGAACAGGGATGGGTTACATTGCAATTAACTCGAGATTCAGAAAATTCTCAAAGATATTTTTCAGCAAGATCAGTCACTGGGTTTCTTTCTGATGTATATTCCAAAGCTGCTGACGAAGTTGGAAAAGTCCATTTAATTGCGGATGAAAGGGTTCAAGGAGCCGTTTTTGATCTTCCAGAGGACATTGCTAAAGAGTTGCTTGAGAAGGACATACCAGCTGGAAACACTATTTCCAAAGTCACCAAGTTACCTCCTTTGCAAGATGATGGGCCTCCAAGTGATTTCTATGGGAAGTTTTCCGATAGAGAACGAAATAACCGAAGAGGAGGTTCTAGGGATGGGAGAGGTTTTAGATCCTCGCGGGGATGGGATGGAGGCCGAGGCTCTGATGATGATTTTGGTGACTCGTCTAGGAGGGGTGGCAGAAGTTATAAATCTGGCAACAGCTGGTCCAAACCAGAAAGAAGCAGTCGGGATGATTGGCAAATTGGAGGCAGACAATCGAGCAGATCTTCTTCATCACCGAACAGAAGCTTTGCAGGGACCTGTTTTACTTGTGGGGAATCTGGGCATCGAGCGTCGGACTGTCCAAACAAGCGAGGCGACTTTTTTTAA | 2262 | 0.4403 | MASITAIGASTACKLPSLELYKKHKLTSISTSSVKFHFSDGNKSRHINRLANFNSSDRFLPSAVATPNSSSSSLLSDEAFKGLGSGFDGESEDEDFPSRTTSINADELDISKLDLPSQLVDSLRDRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIINGLDDGQDSGPYSRRRLPRALVLAPTRELAKQVEKEIKESAPYLKTVCIYGGVSYVTQQSALSRGVDVVVGTPGRLIDLINGNTLKLSEVEYLVLDEADQMLAVGFEEDVEVILEKLPAKRQSMLFSATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGTAILMFTGSQRRTVRSLERDVGCKFEFVNAPSVEDVLESSAEQVVVTLNGVHPESIAFFIPTAQKLIEEKGTTALAAALAQMSGFSQPPSSRSLITHEQGWVTLQLTRDSENSQRYFSARSVTGFLSDVYSKAADEVGKVHLIADERVQGAVFDLPEDIAKELLEKDIPAGNTISKVTKLPPLQDDGPPSDFYGKFSDRERNNRRGGSRDGRGFRSSRGWDGGRGSDDDFGDSSRRGGRSYKSGNSWSKPERSSRDDWQIGGRQSSRSSSSPNRSFAGTCFTCGESGHRASDCPNKRGDFF | 753 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g03867 | 753 | FunFam | Nucleolar RNA helicase II | 337 | 527 | - | - | |
Mepo3g03867 | 753 | SMART | c2hcfinal6 | 731 | 747 | IPR001878 | GO:0003676|GO:0008270 | |
Mepo3g03867 | 753 | Gene3D | - | 109 | 319 | IPR027417 | - | |
Mepo3g03867 | 753 | Pfam | Zinc knuckle | 730 | 747 | IPR001878 | GO:0003676|GO:0008270 | |
Mepo3g03867 | 753 | CDD | GUCT_Hera | 543 | 623 | - | - | |
Mepo3g03867 | 753 | Pfam | GUCT (NUC152) domain | 536 | 636 | IPR012562 | GO:0003723|GO:0004386|GO:0005524 | |
Mepo3g03867 | 753 | SMART | helicmild6 | 369 | 449 | IPR001650 | - | |
Mepo3g03867 | 753 | Gene3D | - | 721 | 751 | - | - | |
Mepo3g03867 | 753 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 185 | 470 | IPR027417 | - | |
Mepo3g03867 | 753 | MobiDBLite | consensus disorder prediction | 644 | 688 | - | - | |
Mepo3g03867 | 753 | CDD | DEADc | 119 | 316 | - | - | |
Mepo3g03867 | 753 | Pfam | DEAD/DEAH box helicase | 132 | 304 | IPR011545 | GO:0003676|GO:0005524 | |
Mepo3g03867 | 753 | PANTHER | ATP-DEPENDENT RNA HELICASE RHLE-RELATED | 106 | 683 | - | - | |
Mepo3g03867 | 753 | SUPERFAMILY | Retrovirus zinc finger-like domains | 712 | 750 | IPR036875 | GO:0003676|GO:0008270 | |
Mepo3g03867 | 753 | FunFam | ATP-dependent RNA helicase RhlE | 100 | 318 | - | - | |
Mepo3g03867 | 753 | CDD | SF2_C_DEAD | 329 | 458 | - | - | |
Mepo3g03867 | 753 | MobiDBLite | consensus disorder prediction | 711 | 732 | - | - | |
Mepo3g03867 | 753 | Gene3D | - | 330 | 531 | IPR027417 | - | |
Mepo3g03867 | 753 | SMART | ultradead3 | 127 | 332 | IPR014001 | - | |
Mepo3g03867 | 753 | ProSiteProfiles | Zinc finger CCHC-type profile. | 732 | 747 | IPR001878 | GO:0003676|GO:0008270 | |
Mepo3g03867 | 753 | Pfam | Helicase conserved C-terminal domain | 341 | 449 | IPR001650 | - | |
Mepo3g03867 | 753 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 344 | 504 | IPR001650 | - | |
Mepo3g03867 | 753 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 139 | 315 | IPR014001 | - | |
Mepo3g03867 | 753 | MobiDBLite | consensus disorder prediction | 627 | 753 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g03867 | Mepo-Chr3 | 48140537 | 48146548 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g03867 | 89 | 471 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 35.990 | 8.23e-65 | 219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g03867 | - | - | gmx:100779706 | 1025.39 |